Literature DB >> 27156629

Strategies of genome editing in mycobacteria: Achievements and challenges.

Eira Choudhary1, Ajitesh Lunge2, Nisheeth Agarwal3.   

Abstract

Tremendous amount of physiological and functional complexities acquired through decades of evolutionary pressure makes Mycobacterium tuberculosis (Mtb) one of the most dreadful microorganisms infecting humans from centuries. Astonishing advances in genomics and genome editing tools substantially grew our knowledge about Mtb as an organism but dramatically failed to completely understand it as a pathogen. Though conventional tools based on homologous recombination, antisense, controlled proteolysis, etc. have made important contributions in advancing our understanding of the pathophysiology of Mtb, yet these approaches have not accentuated our exploration of mycobacterium on account of certain technical limitations. In this review article we have compiled various approaches implemented in genome editing of mycobacteria along with the latest adaptation of clustered regularly interspaced short palindromic repeat (CRISPR)-interference (CRISPRi), emphasizing the achievements and challenges associated with these techniques.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  CRISPRi; Genome editing; Homologous recombination; Mycobacterium tuberculosis

Mesh:

Year:  2016        PMID: 27156629     DOI: 10.1016/j.tube.2016.03.005

Source DB:  PubMed          Journal:  Tuberculosis (Edinb)        ISSN: 1472-9792            Impact factor:   3.131


  5 in total

1.  Post-translational knockdown and post-secretional modification of EsxA determine contribution of EsxA membrane permeabilizing activity for mycobacterial intracellular survival.

Authors:  Yanqing Bao; Lin Wang; Jianjun Sun
Journal:  Virulence       Date:  2021-12       Impact factor: 5.882

2.  A CRISPR interference platform for selective downregulation of gene expression in Borrelia burgdorferi.

Authors:  Constantin N Takacs; Molly Scott; Yunjie Chang; Zachary A Kloos; Irnov Irnov; Patricia A Rosa; Jun Liu; Christine Jacobs-Wagner
Journal:  Appl Environ Microbiol       Date:  2020-11-30       Impact factor: 4.792

Review 3.  A Critical Review: Recent Advancements in the Use of CRISPR/Cas9 Technology to Enhance Crops and Alleviate Global Food Crises.

Authors:  Adnan Rasheed; Rafaqat Ali Gill; Muhammad Umair Hassan; Athar Mahmood; Sameer Qari; Qamar U Zaman; Muhammad Ilyas; Muhammad Aamer; Maria Batool; Huijie Li; Ziming Wu
Journal:  Curr Issues Mol Biol       Date:  2021-11-11       Impact factor: 2.976

Review 4.  Rational development of mycobacteria cell factory for advancing the steroid biomanufacturing.

Authors:  Xin-Xin Wang; Xia Ke; Zhi-Qiang Liu; Yu-Guo Zheng
Journal:  World J Microbiol Biotechnol       Date:  2022-08-17       Impact factor: 4.253

5.  Promoter mutagenesis for fine-tuning expression of essential genes in Mycobacterium tuberculosis.

Authors:  Francesca Boldrin; Giulia Degiacomi; Agnese Serafini; Gaëlle S Kolly; Marcello Ventura; Claudia Sala; Roberta Provvedi; Giorgio Palù; Stewart T Cole; Riccardo Manganelli
Journal:  Microb Biotechnol       Date:  2017-10-27       Impact factor: 5.813

  5 in total

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