UNLABELLED: The popularity of using NMR spectroscopy in metabolomics and natural products has driven the development of an array of NMR spectral analysis tools and databases. Particularly, web applications are well used recently because they are platform-independent and easy to extend through reusable web components. Currently available web applications provide the analysis of NMR spectra. However, they still lack the necessary processing and interactive visualization functionalities. To overcome these limitations, we present NMRPro, a web component that can be easily incorporated into current web applications, enabling easy-to-use online interactive processing and visualization. NMRPro integrates server-side processing with client-side interactive visualization through three parts: a python package to efficiently process large NMR datasets on the server-side, a Django App managing server-client interaction, and SpecdrawJS for client-side interactive visualization. AVAILABILITY AND IMPLEMENTATION: Demo and installation instructions are available at http://mamitsukalab.org/tools/nmrpro/ CONTACT: mohamed@kuicr.kyoto-u.ac.jp SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
UNLABELLED: The popularity of using NMR spectroscopy in metabolomics and natural products has driven the development of an array of NMR spectral analysis tools and databases. Particularly, web applications are well used recently because they are platform-independent and easy to extend through reusable web components. Currently available web applications provide the analysis of NMR spectra. However, they still lack the necessary processing and interactive visualization functionalities. To overcome these limitations, we present NMRPro, a web component that can be easily incorporated into current web applications, enabling easy-to-use online interactive processing and visualization. NMRPro integrates server-side processing with client-side interactive visualization through three parts: a python package to efficiently process large NMR datasets on the server-side, a Django App managing server-client interaction, and SpecdrawJS for client-side interactive visualization. AVAILABILITY AND IMPLEMENTATION: Demo and installation instructions are available at http://mamitsukalab.org/tools/nmrpro/ CONTACT: mohamed@kuicr.kyoto-u.ac.jp SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
Authors: Hamid R Eghbalnia; Pedro R Romero; William M Westler; Kumaran Baskaran; Eldon L Ulrich; John L Markley Journal: Curr Opin Biotechnol Date: 2016-09-16 Impact factor: 9.740
Authors: Kristian Peters; James Bradbury; Sven Bergmann; Marco Capuccini; Marta Cascante; Pedro de Atauri; Timothy M D Ebbels; Carles Foguet; Robert Glen; Alejandra Gonzalez-Beltran; Ulrich L Günther; Evangelos Handakas; Thomas Hankemeier; Kenneth Haug; Stephanie Herman; Petr Holub; Massimiliano Izzo; Daniel Jacob; David Johnson; Fabien Jourdan; Namrata Kale; Ibrahim Karaman; Bita Khalili; Payam Emami Khonsari; Kim Kultima; Samuel Lampa; Anders Larsson; Christian Ludwig; Pablo Moreno; Steffen Neumann; Jon Ander Novella; Claire O'Donovan; Jake T M Pearce; Alina Peluso; Marco Enrico Piras; Luca Pireddu; Michelle A C Reed; Philippe Rocca-Serra; Pierrick Roger; Antonio Rosato; Rico Rueedi; Christoph Ruttkies; Noureddin Sadawi; Reza M Salek; Susanna-Assunta Sansone; Vitaly Selivanov; Ola Spjuth; Daniel Schober; Etienne A Thévenot; Mattia Tomasoni; Merlijn van Rijswijk; Michael van Vliet; Mark R Viant; Ralf J M Weber; Gianluigi Zanetti; Christoph Steinbeck Journal: Gigascience Date: 2019-02-01 Impact factor: 6.524