Literature DB >> 2714253

In vitro synthesis of vertebrate U1 snRNA.

E Lund1, J E Dahlberg.   

Abstract

We have developed a DNA-dependent in vitro transcription system for vertebrate snRNA genes. By isolating the nuclei (germinal vesicles, GVs) of Xenopus laevis oocytes under oil to maintain the in vivo composition of their internal milieu, we are able to prepare nuclei that retain their ability to synthesize snRNAs efficiently. Homogenates of these GVs synthesize correctly initiated and terminated U1 snRNA using exogenous X.laevis U1 genes as templates. The templates may be either injected into the nucleus prior to its isolation or added to the nuclear homogenate.

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Year:  1989        PMID: 2714253      PMCID: PMC400801          DOI: 10.1002/j.1460-2075.1989.tb03375.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  42 in total

1.  3' end formation of U1 snRNA precursors is coupled to transcription from snRNA promoters.

Authors:  H E de Vegvar; E Lund; J E Dahlberg
Journal:  Cell       Date:  1986-10-24       Impact factor: 41.582

2.  Structural and functional analysis of chicken U4 small nuclear RNA genes.

Authors:  M L Hoffman; G M Korf; K J McNamara; W E Stumph
Journal:  Mol Cell Biol       Date:  1986-11       Impact factor: 4.272

3.  Transcription boundaries of U1 small nuclear RNA.

Authors:  G R Kunkel; T Pederson
Journal:  Mol Cell Biol       Date:  1985-09       Impact factor: 4.272

4.  Cap trimethylation of U snRNA is cytoplasmic and dependent on U snRNP protein binding.

Authors:  I W Mattaj
Journal:  Cell       Date:  1986-09-12       Impact factor: 41.582

5.  A common octamer motif binding protein is involved in the transcription of U6 snRNA by RNA polymerase III and U2 snRNA by RNA polymerase II.

Authors:  P Carbon; S Murgo; J P Ebel; A Krol; G Tebb; L W Mattaj
Journal:  Cell       Date:  1987-10-09       Impact factor: 41.582

6.  Xenopus tropicalis U6 snRNA genes transcribed by Pol III contain the upstream promoter elements used by Pol II dependent U snRNA genes.

Authors:  A Krol; P Carbon; J P Ebel; B Appel
Journal:  Nucleic Acids Res       Date:  1987-03-25       Impact factor: 16.971

7.  Properties of a U1 RNA enhancer-like sequence.

Authors:  G Ciliberto; F Palla; G Tebb; I W Mattaj; L Philipson
Journal:  Nucleic Acids Res       Date:  1987-03-25       Impact factor: 16.971

8.  Accurate initiation at RNA polymerase II promoters in extracts from Saccharomyces cerevisiae.

Authors:  N F Lue; R D Kornberg
Journal:  Proc Natl Acad Sci U S A       Date:  1987-12       Impact factor: 11.205

9.  Transcriptionally inactive oocyte-type 5S RNA genes of Xenopus laevis are complexed with TFIIIA in vitro.

Authors:  L J Peck; L Millstein; P Eversole-Cire; J M Gottesfeld; A Varshavsky
Journal:  Mol Cell Biol       Date:  1987-10       Impact factor: 4.272

10.  The transcription of Xenopus laevis embryonic U1 snRNA genes changes when oocytes mature into eggs.

Authors:  E Lund; C J Bostock; J E Dahlberg
Journal:  Genes Dev       Date:  1987-03       Impact factor: 11.361

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  22 in total

1.  3'-end-dependent formation of U6 small nuclear ribonucleoprotein particles in Xenopus laevis oocyte nuclei.

Authors:  M P Terns; E Lund; J E Dahlberg
Journal:  Mol Cell Biol       Date:  1992-07       Impact factor: 4.272

2.  Nuclear processing of the 3'-terminal nucleotides of pre-U1 RNA in Xenopus laevis oocytes.

Authors:  H Yang; M L Moss; E Lund; J E Dahlberg
Journal:  Mol Cell Biol       Date:  1992-04       Impact factor: 4.272

3.  Octamer and SPH motifs in the U1 enhancer cooperate to activate U1 RNA gene expression.

Authors:  K A Roebuck; D P Szeto; K P Green; Q N Fan; W E Stumph
Journal:  Mol Cell Biol       Date:  1990-01       Impact factor: 4.272

4.  Accurate and efficient RNA polymerase II transcription with a soluble nuclear fraction derived from Drosophila embryos.

Authors:  R T Kamakaka; C M Tyree; J T Kadonaga
Journal:  Proc Natl Acad Sci U S A       Date:  1991-02-01       Impact factor: 11.205

5.  The distal elements, OCT and SPH, stimulate the formation of preinitiation complexes on a human U6 snRNA gene promoter in vitro.

Authors:  G R Kunkel; J D Hixson
Journal:  Nucleic Acids Res       Date:  1998-03-15       Impact factor: 16.971

6.  Increasing the distance between the snRNA promoter and the 3' box decreases the efficiency of snRNA 3'-end formation.

Authors:  L Ramamurthy; T C Ingledue; D R Pilch; B K Kay; W F Marzluff
Journal:  Nucleic Acids Res       Date:  1996-11-15       Impact factor: 16.971

7.  Initiation and termination of human U1 RNA transcription requires the concerted action of multiple flanking elements.

Authors:  H E Neuman de Vegvar; J E Dahlberg
Journal:  Nucleic Acids Res       Date:  1989-11-25       Impact factor: 16.971

8.  Nucleocytoplasmic transport and processing of small nuclear RNA precursors.

Authors:  H E Neuman de Vegvar; J E Dahlberg
Journal:  Mol Cell Biol       Date:  1990-07       Impact factor: 4.272

9.  Xenopus Ro ribonucleoproteins: members of an evolutionarily conserved class of cytoplasmic ribonucleoproteins.

Authors:  C A O'Brien; K Margelot; S L Wolin
Journal:  Proc Natl Acad Sci U S A       Date:  1993-08-01       Impact factor: 11.205

10.  m3G cap hypermethylation of U1 small nuclear ribonucleoprotein (snRNP) in vitro: evidence that the U1 small nuclear RNA-(guanosine-N2)-methyltransferase is a non-snRNP cytoplasmic protein that requires a binding site on the Sm core domain.

Authors:  G Plessel; U Fischer; R Lührmann
Journal:  Mol Cell Biol       Date:  1994-06       Impact factor: 4.272

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