Literature DB >> 27141326

Helitrons in Drosophila: Chromatin modulation and tandem insertions.

Guilherme B Dias1, Pedro Heringer1, Gustavo C S Kuhn1.   

Abstract

Although Helitrons were discovered 15 y ago, they still represent an elusive group of transposable elements (TEs). They are thought to transpose via a rolling-circle mechanism, but no transposition assay has yet been conducted. We have recently characterized a group of Helitrons in Drosophila, named DINE-TR1, that display interesting features, including pronounced enrichment at β-heterochromatin, multiple tandem insertions (TIs) of the entire TE, and that experienced at least 2 independent expansion events of its internal tandem repeats (TRs) in distant Drosophila lineages. Here we discuss 2 aspects of TE dynamics displayed by the DINE-TR1 Helitrons: (i) the general evolutionary impact of piRNA-guided heterochromatin formation via TE-derived TR expansion and (ii) the possible mechanisms that could account for the recurrent TIs of Helitrons.

Entities:  

Keywords:  DINE-1; chromatin sink; gene regulation; piRNA; β-heterochromatin

Year:  2016        PMID: 27141326      PMCID: PMC4836490          DOI: 10.1080/2159256X.2016.1154638

Source DB:  PubMed          Journal:  Mob Genet Elements        ISSN: 2159-2543


  44 in total

1.  Development of hyperactive sleeping beauty transposon vectors by mutational analysis.

Authors:  Hatem Zayed; Zsuzsanna Izsvák; Oliver Walisko; Zoltán Ivics
Journal:  Mol Ther       Date:  2004-02       Impact factor: 11.454

2.  The characterization of DINE-1, a short, interspersed repetitive element present on chromosome and in the centric heterochromatin of Drosophila melanogaster.

Authors:  J Locke; L T Howard; N Aippersbach; L Podemski; R B Hodgetts
Journal:  Chromosoma       Date:  1999-11       Impact factor: 4.316

Review 3.  Why repetitive DNA is essential to genome function.

Authors:  James A Shapiro; Richard von Sternberg
Journal:  Biol Rev Camb Philos Soc       Date:  2005-05

Review 4.  A possible role of "inert" heterochromatin in cell differentiation. Action of and competition for "locking" molecules.

Authors:  E Zuckerkandl
Journal:  Biochimie       Date:  1974       Impact factor: 4.079

5.  Dosage compensation via transposable element mediated rewiring of a regulatory network.

Authors:  Christopher E Ellison; Doris Bachtrog
Journal:  Science       Date:  2013-11-15       Impact factor: 47.728

6.  Identification of multiple binding sites for the THAP domain of the Galileo transposase in the long terminal inverted-repeats.

Authors:  Mar Marzo; Danxu Liu; Alfredo Ruiz; Ronald Chalmers
Journal:  Gene       Date:  2013-05-04       Impact factor: 3.688

7.  Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila.

Authors:  Julius Brennecke; Alexei A Aravin; Alexander Stark; Monica Dus; Manolis Kellis; Ravi Sachidanandam; Gregory J Hannon
Journal:  Cell       Date:  2007-03-08       Impact factor: 41.582

8.  The Role of piRNA-Mediated Epigenetic Silencing in the Population Dynamics of Transposable Elements in Drosophila melanogaster.

Authors:  Yuh Chwen G Lee
Journal:  PLoS Genet       Date:  2015-06-04       Impact factor: 5.917

9.  Computational prediction and molecular confirmation of Helitron transposons in the maize genome.

Authors:  Chunguang Du; Jason Caronna; Limei He; Hugo K Dooner
Journal:  BMC Genomics       Date:  2008-01-28       Impact factor: 3.969

10.  Position effect variegation and viability are both sensitive to dosage of constitutive heterochromatin in Drosophila.

Authors:  Maria Berloco; Gioacchino Palumbo; Lucia Piacentini; Sergio Pimpinelli; Laura Fanti
Journal:  G3 (Bethesda)       Date:  2014-07-21       Impact factor: 3.154

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  3 in total

1.  The large bat Helitron DNA transposase forms a compact monomeric assembly that buries and protects its covalently bound 5'-transposon end.

Authors:  Dalibor Kosek; Ivana Grabundzija; Haotian Lei; Ilija Bilic; Huaibin Wang; Yukun Jin; Graham F Peaslee; Alison B Hickman; Fred Dyda
Journal:  Mol Cell       Date:  2021-08-16       Impact factor: 19.328

2.  Pif1 Helicases and the Evidence for a Prokaryotic Origin of Helitrons.

Authors:  Pedro Heringer; Gustavo C S Kuhn
Journal:  Mol Biol Evol       Date:  2022-01-07       Impact factor: 16.240

3.  Exploring the Remote Ties between Helitron Transposases and Other Rolling-Circle Replication Proteins.

Authors:  Pedro Heringer; Gustavo C S Kuhn
Journal:  Int J Mol Sci       Date:  2018-10-09       Impact factor: 5.923

  3 in total

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