| Literature DB >> 27137640 |
Tracey A Bodo Slotta1, David P Horvath2, Michael E Foley3.
Abstract
Weedy invasive Cirsium spp. are widespread in temperate regions of North America and some of their biological control agents have attacked native Cirsium spp. A phylogenetic tree was developed from DNA sequences for the internal transcribed spacer and external transcribed spacer regions from native and non-native Great Plains Cirsium spp. and other thistles to determine if host specificity follows phylogeny. The monophyly of Cirsium spp. and Carduus within the tribe Cardinae was confirmed with native North American and European lineages of the Cirsium spp. examined. We did not detect interspecific hybridization between the introduced invasive and the native North American Cirsium spp. Selected host-biological control agent interactions were mapped onto the phylogenic tree derived by maximum likelihood analysis to examine the co-occurrence of known hosts with biological control agents. Within Cirsium-Cardueae, the insect biological control agents do not associate with host phylogenetic lines. Thus, more comprehensive testing of species in host-specificity trials, rather than relying on a single representative of a given clade may be necessary; because the assumption that host-specificity follows phylogeny does not necessarily hold. Since the assumption does not always hold, it will also be important to evaluate ecological factors to provide better cues for host specificity.Entities:
Keywords: Canada thistle; Cirsium; Cirsium arvense; biological control; phylogeny; thistles; weed
Year: 2012 PMID: 27137640 PMCID: PMC4844267 DOI: 10.3390/plants1020061
Source DB: PubMed Journal: Plants (Basel) ISSN: 2223-7747
Species for phylogenetic analysis are indicated. Sequences generated for the current study are indicated by the population identification numbers with species (e.g., arvense IN1.1), corresponding collection information (Sources of TBS and MF (authors) and collaborator (J. Fant), or voucher number). Voucher specimens were deposited at the U.S. National Arboretum (NA) herbarium and the accession number is provided. Published sequences included in the analysis are indicated by the accession number of GenBank.
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| Source | Voucher at NA | ITS | ETS |
|---|---|---|---|---|---|
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| TBS2004-13 | 48765 | JX867618 | JX867646 |
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| TBS2004-70 | 48793 | JX867619 | JX867647 |
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| TBS2004-71 | 48792 | JX867620 | JX867648 |
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| TBS2004-33 | 48790 | JX867621 | JX867649 |
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| TBS2004-72 | 48842 | JX867622 | JX867650 |
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| TBS2004-58 | 48834 | JX867623 | JX867651 |
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| TBS2004-30 | 48817 | JX867624 | JX867652 |
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| TBS | ---- | JX867625 | JX867653 |
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| TBS2005-36 | 48883 | JX867626 | JX867654 |
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| TBS2004-64 | 48867 | JX867627 | JX867655 |
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| TBS2004-62 | 48861 | JX867628 | JX867656 |
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| TBS2005-25 | 48870 | JX867629 | JX867657 |
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| TBS2004-60 | 48872 | JX867630 | JX867658 |
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| TBS2005-33 | 48878 | JX867631 | JX867659 |
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| Jeremie Fant, Chicago Bot Gard | JX867632 | JX867660 | |
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| TBS2005-17 | 48873 | JX867633 | JX867661 |
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| Jeremie Fant, Chicago Bot Gard | JX867634 | JX867662 | |
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| TBS2004-59 | 48877 | JX867635 | JX867663 |
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| TBS2004-59 | 48877 | JX867636 | JX867664 |
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| TBS sn. 27 July 2005 | 48876 | JX867637 | JX867665 |
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| MF2 | 48794 | JX867638 | JX867666 |
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| MF2 | 48794 | JX867639 | JX867667 |
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| TBS2005-26 | 48812 | JX867640 | JX867668 |
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| GenBank | AF443683 | AF443735 | |
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| GenBank | AF443684 | AF443736 | |
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| GenBank | AF443680 | AF443734 | |
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| GenBank | AF443681 | AF443734 | |
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| GenBank | AF443682 | AF443734 | |
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| GenBank | AF443685 | AF443737 | |
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| GenBank | AF443687 | AF443739 | |
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| GenBank | AF443688 | AF443740 | |
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| GenBank | AF443689 | AF443741 | |
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| GenBank | AF443690 | AF443742 | |
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| GenBank | AF443691 | AF443743 | |
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| GenBank | AF443692 | AF443744 | |
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| GenBank | AF443686 | AF443738 | |
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| GenBank | AF443694 | AF443746 | |
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| GenBank | AF443711 | AF443763 | |
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| GenBank | AF443726 | AF443778 | |
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| GenBank | AF443725 | AF443777 | |
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| GenBank | AF443696 | AF443748 | |
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| GenBank | AF443697 | AF443749 | |
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| GenBank | AF443698 | AF443750 | |
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| GenBank | AF443699 | AF443751 | |
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| GenBank | AF443727 | AF443779 | |
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| GenBank | AF443700 | AF443752 | |
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| GenBank | AF443701 | AF443753 | |
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| GenBank | AF443717 | AF443769 | |
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| GenBank | AF443722 | AF443774 | |
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| GenBank | AF443718 | AF443770 | |
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| GenBank | AF443703 | AF443755 | |
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| GenBank | AF443702 | AF443754 | |
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| GenBank | AF443704 | AF443756 | |
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| GenBank | AF443705 | AF443757 | |
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| GenBank | AF443706 | AF443758 | |
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| GenBank | AF443707 | AF443759 | |
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| GenBank | AF443708 | AF443760 | |
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| GenBank | AF443709 | AF443761 | |
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| GenBank | AF443710 | AF443762 | |
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| GenBank | AF443693 | AF443745 | |
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| GenBank | AF443720 | AF443772 | |
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| GenBank | AF443712 | AF443764 | |
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| GenBank | AF443721 | AF443773 | |
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| GenBank | AF443723 | AF443775 | |
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| GenBank | AF443713 | AF443765 | |
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| GenBank | AF443714 | AF443766 | |
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| GenBank | AF443715 | AF443767 | |
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| GenBank | AF443716 | AF443738 | |
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| GenBank | AF443719 | AF443771 | |
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| MF3 | 48795 | JX867643 | JX867669 |
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| GenBank | AF443678 | AF443730 | |
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| TBS2005-14 | 48801 | JX867642 | JX867670 |
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| GenBank | AF44679 | AF4433731 | |
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| GenBank | AJ867986-7 | AJ867985 | |
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| GenBank | AJ867989 | AJ867988 | |
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| TBS | greenhouse grown | JX867643 | JX867671 |
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| TBS | greenhouse grown | JX867644 | Not sequenced |
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| GenBank | AJ868001-2 | AJ868000 | |
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| GenBank | AF443676 | AF443728 | |
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| GenBank | AY78046 | AF4433729 | |
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| GenBank | AJ868070-1 | AJ868069 | |
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| spp. | TBS | greenhouse grown | JX867645 | JX867672 |
Figure 1Maximum likelihood analysis of ITS1, ITS2, and ETS. Biological control agents are labeled as follows Trichosirocalus horridus (*), Larinus planus (+), Rhinocyllis conicus (#), Puccinia carduorus (%), and Pseudomonas syringe (@). Cirs = Cirsium, Card = Carduus, TS = sequence generated here, GB = sequence available on GenBank. Bootstrap values (1,000 iterations) are indicated when support was greater than 50%.