Literature DB >> 27137209

The expanding footprint of CRISPR/Cas9 in the plant sciences.

Scott M Schaeffer1, Paul A Nakata2.   

Abstract

CRISPR/Cas9 has evolved and transformed the field of biology at an unprecedented pace. From the initial purpose of introducing a site specific mutation within a genome of choice, this technology has morphed into enabling a wide array of molecular applications, including site-specific transgene insertion and multiplexing for the simultaneous induction of multiple cleavage events. Efficiency, specificity, and flexibility are key attributes that have solidified CRISPR/Cas9 as the genome-editing tool of choice by scientists from all areas of biology. Within the field of plant biology, several CRISPR/Cas9 technologies, developed in other biological systems, have been successfully implemented to probe plant gene function and to modify specific crop traits. It is anticipated that this trend will persist and lead to the development of new applications and modifications of the CRISPR technology, adding to an ever-expanding collection of genome-editing tools. We envision that these tools will bestow plant researchers with new utilities to alter genome complexity, engineer site-specific integration events, control gene expression, generate transgene-free edited crops, and prevent or cure plant viral disease. The successful implementation of such utilities will represent a new frontier in plant biotechnology.

Entities:  

Keywords:  CRISPR; Cas9; Crop improvement; Functional genomics; Gene editing; Gene knock-in

Mesh:

Year:  2016        PMID: 27137209     DOI: 10.1007/s00299-016-1987-x

Source DB:  PubMed          Journal:  Plant Cell Rep        ISSN: 0721-7714            Impact factor:   4.570


  151 in total

Review 1.  Haploids in flowering plants: origins and exploitation.

Authors:  Jim M Dunwell
Journal:  Plant Biotechnol J       Date:  2010-03-11       Impact factor: 9.803

Review 2.  Multi-gene engineering in plants with RNA-guided Cas9 nuclease.

Authors:  Oleg Raitskin; Nicola J Patron
Journal:  Curr Opin Biotechnol       Date:  2015-12-18       Impact factor: 9.740

3.  Targeted genome modification of crop plants using a CRISPR-Cas system.

Authors:  Qiwei Shan; Yanpeng Wang; Jun Li; Yi Zhang; Kunling Chen; Zhen Liang; Kang Zhang; Jinxing Liu; Jianzhong Jeff Xi; Jin-Long Qiu; Caixia Gao
Journal:  Nat Biotechnol       Date:  2013-08       Impact factor: 54.908

4.  Efficient targeted mutagenesis in potato by the CRISPR/Cas9 system.

Authors:  Shaohui Wang; Shuaibin Zhang; Wanxing Wang; Xingyao Xiong; Fanrong Meng; Xia Cui
Journal:  Plant Cell Rep       Date:  2015-06-17       Impact factor: 4.570

5.  Rational design of a split-Cas9 enzyme complex.

Authors:  Addison V Wright; Samuel H Sternberg; David W Taylor; Brett T Staahl; Jorge A Bardales; Jack E Kornfeld; Jennifer A Doudna
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-23       Impact factor: 11.205

6.  Efficient gene editing in tomato in the first generation using the clustered regularly interspaced short palindromic repeats/CRISPR-associated9 system.

Authors:  Christopher Brooks; Vladimir Nekrasov; Zachary B Lippman; Joyce Van Eck
Journal:  Plant Physiol       Date:  2014-09-15       Impact factor: 8.340

7.  DNA replicons for plant genome engineering.

Authors:  Nicholas J Baltes; Javier Gil-Humanes; Tomas Cermak; Paul A Atkins; Daniel F Voytas
Journal:  Plant Cell       Date:  2014-01-17       Impact factor: 11.277

8.  Establishing a CRISPR-Cas-like immune system conferring DNA virus resistance in plants.

Authors:  Xiang Ji; Huawei Zhang; Yi Zhang; Yanpeng Wang; Caixia Gao
Journal:  Nat Plants       Date:  2015-09-28       Impact factor: 15.793

9.  High-frequency modification of plant genes using engineered zinc-finger nucleases.

Authors:  Jeffrey A Townsend; David A Wright; Ronnie J Winfrey; Fengli Fu; Morgan L Maeder; J Keith Joung; Daniel F Voytas
Journal:  Nature       Date:  2009-04-29       Impact factor: 49.962

10.  CRISPR-Cas9 Can Inhibit HIV-1 Replication but NHEJ Repair Facilitates Virus Escape.

Authors:  Gang Wang; Na Zhao; Ben Berkhout; Atze T Das
Journal:  Mol Ther       Date:  2016-01-22       Impact factor: 11.454

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  15 in total

1.  Next-generation precision genome engineering and plant biotechnology.

Authors:  Magdy M Mahfouz; Teodoro Cardi; C Neal Stewart
Journal:  Plant Cell Rep       Date:  2016-06-06       Impact factor: 4.570

2.  Sustainable bioenergy for climate mitigation: developing drought-tolerant trees and grasses.

Authors:  G Taylor; I S Donnison; D Murphy-Bokern; M Morgante; M-B Bogeat-Triboulot; R Bhalerao; M Hertzberg; A Polle; A Harfouche; F Alasia; V Petoussi; D Trebbi; K Schwarz; J J B Keurentjes; M Centritto; B Genty; J Flexas; E Grill; S Salvi; W J Davies
Journal:  Ann Bot       Date:  2019-10-29       Impact factor: 4.357

3.  CRISPR/Cas9-mediated gfp gene inactivation in Arabidopsis suspension cells.

Authors:  Natalya V Permyakova; Yury V Sidorchuk; Tatyana V Marenkova; Sofya A Khozeeva; Vitaly V Kuznetsov; Alla A Zagorskaya; Sergei M Rozov; Elena V Deineko
Journal:  Mol Biol Rep       Date:  2019-08-07       Impact factor: 2.316

4.  Efficient CRISPR/Cas9-based gene knockout in watermelon.

Authors:  Shouwei Tian; Linjian Jiang; Qiang Gao; Jie Zhang; Mei Zong; Haiying Zhang; Yi Ren; Shaogui Guo; Guoyi Gong; Fan Liu; Yong Xu
Journal:  Plant Cell Rep       Date:  2016-12-19       Impact factor: 4.570

5.  Efficient genome editing in wheat using Cas9 and Cpf1 (AsCpf1 and LbCpf1) nucleases.

Authors:  Dongjin Kim; Megan Hager; Eleanor Brant; Hikmet Budak
Journal:  Funct Integr Genomics       Date:  2021-03-12       Impact factor: 3.410

Review 6.  The Power of CRISPR-Cas9-Induced Genome Editing to Speed Up Plant Breeding.

Authors:  Hieu X Cao; Wenqin Wang; Hien T T Le; Giang T H Vu
Journal:  Int J Genomics       Date:  2016-12-20       Impact factor: 2.326

Review 7.  Gene Editing and Crop Improvement Using CRISPR-Cas9 System.

Authors:  Leena Arora; Alka Narula
Journal:  Front Plant Sci       Date:  2017-11-08       Impact factor: 5.753

Review 8.  Viral Vectors for Plant Genome Engineering.

Authors:  Syed Shan-E-Ali Zaidi; Shahid Mansoor
Journal:  Front Plant Sci       Date:  2017-04-11       Impact factor: 5.753

9.  CRISPR/Cas9-mediated mutagenesis of Clpsk1 in watermelon to confer resistance to Fusarium oxysporum f.sp. niveum.

Authors:  Man Zhang; Qiling Liu; Xingping Yang; Jinhua Xu; Guang Liu; Xiefeng Yao; Runsheng Ren; Jian Xu; Lina Lou
Journal:  Plant Cell Rep       Date:  2020-03-09       Impact factor: 4.570

10.  CRISPR/Cas9-mediated gene targeting in Arabidopsis using sequential transformation.

Authors:  Daisuke Miki; Wenxin Zhang; Wenjie Zeng; Zhengyan Feng; Jian-Kang Zhu
Journal:  Nat Commun       Date:  2018-05-17       Impact factor: 14.919

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