Literature DB >> 27137150

Differential expression of long non-coding RNAs in hyperoxia-induced bronchopulmonary dysplasia.

Tian-Ping Bao1, Rong Wu2, Huai-Ping Cheng1, Xian-Wei Cui3, Zhao-Fang Tian1.   

Abstract

Bronchopulmonary dysplasia (BPD) is a common complication of premature birth that seriously affects the survival rate and quality of life among preterm neonates. Long non-coding RNAs (lncRNAs) have been implicated in many human diseases. However, the role of lncRNAs in the pathogenesis of BPD remains poorly understood. Here, we exposed neonatal C57BL/6J mice to 95% concentrations of ambient oxygen and established a mouse lung injury model that mimicked human BPD. Next, we compared lncRNA and messenger RNA (mRNA) expression profiles between BPD and normal lung tissues using a high-throughput mouse lncRNA + mRNA array system. Compared with the control group, 882 lncRNAs were upregulated, and 887 lncRNAs were downregulated in BPD lung tissues. We validated some candidate BPD-associated lncRNAs by real-time quantitative reverse-transcription polymerase chain reaction analysis in eight pairs of BPD and normal lung tissues. Gene ontology, pathway and bioinformatics analyses revealed that a downregulated lncRNA, namely AK033210, associated with tenascin C may be involved in the pathogenesis of BPD. To the best of our knowledge, our study is the first to reveal differential lncRNA expression in BPD, which provides a foundation for further understanding of the molecular mechanism of BPD development.
Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

Entities:  

Keywords:  bronchopulmonary dysplasia; hyperoxia; long non-coding RNA; microarray analysis

Mesh:

Substances:

Year:  2016        PMID: 27137150     DOI: 10.1002/cbf.3190

Source DB:  PubMed          Journal:  Cell Biochem Funct        ISSN: 0263-6484            Impact factor:   3.685


  10 in total

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Authors:  Cristina M Alvira; Rory E Morty
Journal:  J Pediatr       Date:  2017-11       Impact factor: 4.406

2.  Lung omics signatures in a bronchopulmonary dysplasia and pulmonary hypertension-like murine model.

Authors:  Amrit Kumar Shrestha; Vashisht Y N Gopal; Renuka T Menon; Joseph L Hagan; Shixia Huang; Binoy Shivanna
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2018-07-26       Impact factor: 5.464

3.  Silencing of Long Non-Coding RNA X Inactive Specific Transcript (Xist) Contributes to Suppression of Bronchopulmonary Dysplasia Induced by Hyperoxia in Newborn Mice via microRNA-101-3p and the transforming growth factor-beta 1 (TGF-β1)/Smad3 Axis.

Authors:  Wenhao Yuan; Xiaoyan Liu; Lingkong Zeng; Hanchu Liu; Baohuan Cai; Yanping Huang; Xuwei Tao; Luxia Mo; Lingxia Zhao; Chunfang Gao
Journal:  Med Sci Monit       Date:  2020-10-18

Review 4.  Oxygen toxicity: cellular mechanisms in normobaric hyperoxia.

Authors:  Ricardo Alva; Maha Mirza; Adam Baiton; Lucas Lazuran; Lyuda Samokysh; Ava Bobinski; Cale Cowan; Alvin Jaimon; Dede Obioru; Tala Al Makhoul; Jeffrey A Stuart
Journal:  Cell Biol Toxicol       Date:  2022-09-16       Impact factor: 6.819

5.  Next-generation sequencing to investigate circular RNA profiles in the peripheral blood of preterm neonates with bronchopulmonary dysplasia.

Authors:  Xiaonan Mao; Yan Guo; Jie Qiu; Li Zhao; Junjie Xu; Jiao Yin; Keyu Lu; Mingshun Zhang; Rui Cheng
Journal:  J Clin Lab Anal       Date:  2020-02-24       Impact factor: 2.352

6.  Changes in the Composition of the Gut Microbiota and the Blood Transcriptome in Preterm Infants at Less than 29 Weeks Gestation Diagnosed with Bronchopulmonary Dysplasia.

Authors:  Feargal J Ryan; Damian P Drew; Chloe Douglas; Lex E X Leong; Max Moldovan; Miriam Lynn; Naomi Fink; Anastasia Sribnaia; Irmeli Penttila; Andrew J McPhee; Carmel T Collins; Maria Makrides; Robert A Gibson; Geraint B Rogers; David J Lynn
Journal:  mSystems       Date:  2019-10-29       Impact factor: 6.496

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Authors:  Rongwe Yangi; Huafei Huang; Qingnv Zhou
Journal:  J Int Med Res       Date:  2020-05       Impact factor: 1.671

8.  Long non-coding RNA MALAT1 targeting STING transcription promotes bronchopulmonary dysplasia through regulation of CREB.

Authors:  Jia-He Chen; Dan-Dan Feng; Yu-Fei Chen; Cai-Xia Yang; Chen-Xia Juan; Qian Cao; Xi Chen; Shuang Liu; Guo-Ping Zhou
Journal:  J Cell Mol Med       Date:  2020-08-18       Impact factor: 5.310

9.  Proteomic analysis of sex differences in hyperoxic lung injury in neonatal mice.

Authors:  Huaiping Cheng; Huifang Wang; Chantong Wu; Yuan Zhang; Tianping Bao; Zhaofang Tian
Journal:  Int J Med Sci       Date:  2020-09-02       Impact factor: 3.738

10.  Tenascin-C expression in the lymph node pre-metastatic niche in muscle-invasive bladder cancer.

Authors:  Christopher R Silvers; Edward M Messing; Hiroshi Miyamoto; Yi-Fen Lee
Journal:  Br J Cancer       Date:  2021-09-25       Impact factor: 7.640

  10 in total

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