Literature DB >> 27137125

A conceptual framework for invasion in microbial communities.

Marta Kinnunen1, Arnaud Dechesne1, Caitlin Proctor2, Frederik Hammes2, David Johnson2, Marcos Quintela-Baluja3, David Graham3, Daniele Daffonchio4, Stilianos Fodelianakis4, Nicole Hahn5, Nico Boon5, Barth F Smets1.   

Abstract

There is a growing interest in controlling-promoting or avoiding-the invasion of microbial communities by new community members. Resource availability and community structure have been reported as determinants of invasion success. However, most invasion studies do not adhere to a coherent and consistent terminology nor always include rigorous interpretations of the processes behind invasion. Therefore, we suggest that a consistent set of definitions and a rigorous conceptual framework are needed. We define invasion in a microbial community as the establishment of an alien microbial type in a resident community and argue how simple criteria to define aliens, residents, and alien establishment can be applied for a wide variety of communities. In addition, we suggest an adoption of the community ecology framework advanced by Vellend (2010) to clarify potential determinants of invasion. This framework identifies four fundamental processes that control community dynamics: dispersal, selection, drift and diversification. While selection has received ample attention in microbial community invasion research, the three other processes are often overlooked. Here, we elaborate on the relevance of all four processes and conclude that invasion experiments should be designed to elucidate the role of dispersal, drift and diversification, in order to obtain a complete picture of invasion as a community process.

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Year:  2016        PMID: 27137125      PMCID: PMC5148196          DOI: 10.1038/ismej.2016.75

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  26 in total

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5.  Local and regional factors influencing bacterial community assembly.

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Authors:  Francisco Acosta; Richard M Zamor; Fares Z Najar; Bruce A Roe; K David Hambright
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  34 in total

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4.  Stochastic processes govern invasion success in microbial communities when the invader is phylogenetically close to resident bacteria.

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Journal:  ISME J       Date:  2018-07-12       Impact factor: 10.302

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Review 6.  Microbial invasions in sludge anaerobic digesters.

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7.  Identification of Valerate as Carrying Capacity Modulator by Analyzing Lactiplantibacillus plantarum Colonization of Colonic Microbiota in vitro.

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8.  Siderophores drive invasion dynamics in bacterial communities through their dual role as public good versus public bad.

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9.  Manipulating the soil microbiomes during a community recovery process with plant beneficial species for the suppression of Fusarium wilt of watermelon.

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