Literature DB >> 27135885

Total ion chromatographic fingerprints combined with chemometrics and mass defect filter to predict antitumor components of Picrasma quassioids.

Yuanyuan Shi1, Hao Zhan2, Liuyi Zhong3, Fangrong Yan2, Feng Feng4, Wenyuan Liu1,5, Ning Xie6.   

Abstract

A method of total ion chromatogram combined with chemometrics and mass defect filter was established for the prediction of active ingredients in Picrasma quassioides samples. The total ion chromatogram data of 28 batches were pretreated with wavelet transformation and correlation optimized warping to correct baseline drifts and retention time shifts. Then partial least squares regression was applied to construct a regression model to bridge the total ion chromatogram fingerprints and the antitumor activity of P. quassioides. Finally, the regression coefficients were used to predict the active peaks in total ion chromatogram fingerprints. In this strategy, mass defect filter was employed to classify and characterize the active peaks from a chemical point of view. A total of 17 constituents were predicted as the potential active compounds, 16 of which were identified as alkaloids by this developed approach. The results showed that the established method was not only simple and easy to operate, but also suitable to predict ultraviolet undetectable compounds and provide chemical information for the prediction of active compounds in herbs.
© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Fingerprints; Liquid chromatography-mass spectrometry; Picrasma quassioides; Total ion chromatogram

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Year:  2016        PMID: 27135885     DOI: 10.1002/jssc.201501410

Source DB:  PubMed          Journal:  J Sep Sci        ISSN: 1615-9306            Impact factor:   3.645


  2 in total

1.  A strategy combining solid-phase extraction, multiple mass defect filtering and molecular networking for rapid structural classification and annotation of natural products: characterization of chemical diversity in Citrus aurantium as a case study.

Authors:  Yi-Kun Wang; Xue-Rong Xiao; Zi-Meng Zhou; Yao Xiao; Wei-Feng Zhu; Hong-Ning Liu; Fei Li
Journal:  Anal Bioanal Chem       Date:  2021-04-06       Impact factor: 4.142

2.  A self-feedback network based on liquid chromatography-quadrupole-time of flight mass spectrometry for system identification of β-carboline alkaloids in Picrasma quassioides.

Authors:  Yuanyuan Shi; Ruoqi Wang; Xiaoyu Zhu; Dongge Xu; Wenyuan Liu; Feng Feng
Journal:  Sci Rep       Date:  2017-10-23       Impact factor: 4.379

  2 in total

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