Literature DB >> 27133796

Genome Editing of Lineage Determinants in Human Pluripotent Stem Cells Reveals Mechanisms of Pancreatic Development and Diabetes.

Zengrong Zhu1, Qing V Li2, Kihyun Lee3, Bess P Rosen4, Federico González1, Chew-Li Soh1, Danwei Huangfu5.   

Abstract

Directed differentiation of human pluripotent stem cells (hPSCs) into somatic counterparts is a valuable tool for studying disease. However, examination of developmental mechanisms in hPSCs remains challenging given complex multi-factorial actions at different stages. Here, we used TALEN and CRISPR/Cas-mediated gene editing and hPSC-directed differentiation for a systematic analysis of the roles of eight pancreatic transcription factors (PDX1, RFX6, PTF1A, GLIS3, MNX1, NGN3, HES1, and ARX). Our analysis not only verified conserved gene requirements between mice and humans but also revealed a number of previously unsuspected developmental mechanisms with implications for type 2 diabetes. These include a role of RFX6 in regulating the number of pancreatic progenitors, a haploinsufficient requirement for PDX1 in pancreatic β cell differentiation, and a potentially divergent role of NGN3 in humans and mice. Our findings support use of systematic genome editing in hPSCs as a strategy for understanding mechanisms underlying congenital disorders.
Copyright © 2016 Elsevier Inc. All rights reserved.

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Year:  2016        PMID: 27133796      PMCID: PMC4892994          DOI: 10.1016/j.stem.2016.03.015

Source DB:  PubMed          Journal:  Cell Stem Cell        ISSN: 1875-9777            Impact factor:   24.633


  57 in total

1.  Cell-surface markers for the isolation of pancreatic cell types derived from human embryonic stem cells.

Authors:  Olivia G Kelly; Man Yin Chan; Laura A Martinson; Kuniko Kadoya; Traci M Ostertag; Kelly G Ross; Mike Richardson; Melissa K Carpenter; Kevin A D'Amour; Evert Kroon; Mark Moorman; Emmanuel E Baetge; Anne G Bang
Journal:  Nat Biotechnol       Date:  2011-07-31       Impact factor: 54.908

2.  Reversal of diabetes with insulin-producing cells derived in vitro from human pluripotent stem cells.

Authors:  Alireza Rezania; Jennifer E Bruin; Payal Arora; Allison Rubin; Irina Batushansky; Ali Asadi; Shannon O'Dwyer; Nina Quiskamp; Majid Mojibian; Tobias Albrecht; Yu Hsuan Carol Yang; James D Johnson; Timothy J Kieffer
Journal:  Nat Biotechnol       Date:  2014-09-11       Impact factor: 54.908

3.  Production of pancreatic hormone-expressing endocrine cells from human embryonic stem cells.

Authors:  Kevin A D'Amour; Anne G Bang; Susan Eliazer; Olivia G Kelly; Alan D Agulnick; Nora G Smart; Mark A Moorman; Evert Kroon; Melissa K Carpenter; Emmanuel E Baetge
Journal:  Nat Biotechnol       Date:  2006-10-19       Impact factor: 54.908

4.  Reduction in pancreatic transcription factor PDX-1 impairs glucose-stimulated insulin secretion.

Authors:  Marcela Brissova; Masakazu Shiota; Wendell E Nicholson; Maureen Gannon; Susan M Knobel; David W Piston; Christopher V E Wright; Alvin C Powers
Journal:  J Biol Chem       Date:  2002-01-07       Impact factor: 5.157

Review 5.  Technical challenges in using human induced pluripotent stem cells to model disease.

Authors:  Krishanu Saha; Rudolf Jaenisch
Journal:  Cell Stem Cell       Date:  2009-12-04       Impact factor: 24.633

6.  Opposing actions of Arx and Pax4 in endocrine pancreas development.

Authors:  Patrick Collombat; Ahmed Mansouri; Jacob Hecksher-Sorensen; Palle Serup; Jens Krull; Gerard Gradwohl; Peter Gruss
Journal:  Genes Dev       Date:  2003-10-15       Impact factor: 11.361

7.  Increased islet apoptosis in Pdx1+/- mice.

Authors:  James D Johnson; Noreen T Ahmed; Dan S Luciani; Zhiqiang Han; Hung Tran; Jun Fujita; Stanley Misler; Helena Edlund; Kenneth S Polonsky
Journal:  J Clin Invest       Date:  2003-04       Impact factor: 14.808

8.  Maturation of human embryonic stem cell-derived pancreatic progenitors into functional islets capable of treating pre-existing diabetes in mice.

Authors:  Alireza Rezania; Jennifer E Bruin; Michael J Riedel; Majid Mojibian; Ali Asadi; Jean Xu; Rebecca Gauvin; Kavitha Narayan; Francis Karanu; John J O'Neil; Ziliang Ao; Garth L Warnock; Timothy J Kieffer
Journal:  Diabetes       Date:  2012-06-27       Impact factor: 9.337

9.  Rfx6 maintains the functional identity of adult pancreatic β cells.

Authors:  Julie Piccand; Perrine Strasser; David J Hodson; Aline Meunier; Tao Ye; Céline Keime; Marie-Christine Birling; Guy A Rutter; Gérard Gradwohl
Journal:  Cell Rep       Date:  2014-12-11       Impact factor: 9.423

10.  PDX-1 is required for pancreatic outgrowth and differentiation of the rostral duodenum.

Authors:  M F Offield; T L Jetton; P A Labosky; M Ray; R W Stein; M A Magnuson; B L Hogan; C V Wright
Journal:  Development       Date:  1996-03       Impact factor: 6.868

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  79 in total

Review 1.  The Nexus of Stem Cell-Derived Beta-Cells and Genome Engineering.

Authors:  Sara D Sackett; Aida Rodriguez; Jon S Odorico
Journal:  Rev Diabet Stud       Date:  2017-06-12

2.  Genome Editing in hPSCs Reveals GATA6 Haploinsufficiency and a Genetic Interaction with GATA4 in Human Pancreatic Development.

Authors:  Zhong-Dong Shi; Kihyun Lee; Dapeng Yang; Sadaf Amin; Nipun Verma; Qing V Li; Zengrong Zhu; Chew-Li Soh; Ritu Kumar; Todd Evans; Shuibing Chen; Danwei Huangfu
Journal:  Cell Stem Cell       Date:  2017-02-09       Impact factor: 24.633

3.  Genetic regulatory signatures underlying islet gene expression and type 2 diabetes.

Authors:  Arushi Varshney; Laura J Scott; Ryan P Welch; Michael R Erdos; Peter S Chines; Narisu Narisu; Ricardo D'O Albanus; Peter Orchard; Brooke N Wolford; Romy Kursawe; Swarooparani Vadlamudi; Maren E Cannon; John P Didion; John Hensley; Anthony Kirilusha; Lori L Bonnycastle; D Leland Taylor; Richard Watanabe; Karen L Mohlke; Michael Boehnke; Francis S Collins; Stephen C J Parker; Michael L Stitzel
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-13       Impact factor: 11.205

4.  Genome editing in human pluripotent stem cells: a systematic approach unrevealing pancreas development and disease.

Authors:  Elena Garreta; Andres Marco; Juan Carlos Izpisua Belmonte; Nuria Montserrat
Journal:  Stem Cell Investig       Date:  2016-11-14

5.  Editing genetics, stem cells are prophetic, what's the best way to model cells of diabetics?

Authors:  Marissa A Scavuzzo; Malgorzata Borowiak
Journal:  Stem Cell Investig       Date:  2016-11-15

6.  Studying pancreas development and diabetes using human pluripotent stem cells.

Authors:  David W Scoville; Anton M Jetten
Journal:  Stem Cell Investig       Date:  2016-11-14

7.  Understanding human fetal pancreas development using subpopulation sorting, RNA sequencing and single-cell profiling.

Authors:  Cyrille Ramond; Belin Selcen Beydag-Tasöz; Ajuna Azad; Martijn van de Bunt; Maja Borup Kjær Petersen; Nicola L Beer; Nicolas Glaser; Claire Berthault; Anna L Gloyn; Mattias Hansson; Mark I McCarthy; Christian Honoré; Anne Grapin-Botton; Raphael Scharfmann
Journal:  Development       Date:  2018-08-15       Impact factor: 6.868

Review 8.  From Reductionism to Holism: Toward a More Complete View of Development Through Genome Engineering.

Authors:  Rebecca K Delker; Richard S Mann
Journal:  Adv Exp Med Biol       Date:  2017       Impact factor: 2.622

9.  Examining How the MAFB Transcription Factor Affects Islet β-Cell Function Postnatally.

Authors:  Holly A Cyphert; Emily M Walker; Yan Hang; Sangeeta Dhawan; Rachana Haliyur; Lauren Bonatakis; Dana Avrahami; Marcela Brissova; Klaus H Kaestner; Anil Bhushan; Alvin C Powers; Roland Stein
Journal:  Diabetes       Date:  2018-11-13       Impact factor: 9.461

Review 10.  Insights into pancreatic islet cell dysfunction from type 2 diabetes mellitus genetics.

Authors:  Nicole A J Krentz; Anna L Gloyn
Journal:  Nat Rev Endocrinol       Date:  2020-02-25       Impact factor: 43.330

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