Literature DB >> 27131533

A universal preconditioner for simulating condensed phase materials.

David Packwood1, James Kermode2, Letif Mones1, Noam Bernstein3, John Woolley4, Nicholas Gould5, Christoph Ortner1, Gábor Csányi6.   

Abstract

We introduce a universal sparse preconditioner that accelerates geometry optimisation and saddle point search tasks that are common in the atomic scale simulation of materials. Our preconditioner is based on the neighbourhood structure and we demonstrate the gain in computational efficiency in a wide range of materials that include metals, insulators, and molecular solids. The simple structure of the preconditioner means that the gains can be realised in practice not only when using expensive electronic structure models but also for fast empirical potentials. Even for relatively small systems of a few hundred atoms, we observe speedups of a factor of two or more, and the gain grows with system size. An open source Python implementation within the Atomic Simulation Environment is available, offering interfaces to a wide range of atomistic codes.

Year:  2016        PMID: 27131533     DOI: 10.1063/1.4947024

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  5 in total

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Journal:  Nanomaterials (Basel)       Date:  2022-06-14       Impact factor: 5.719

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Journal:  Nanomaterials (Basel)       Date:  2022-01-24       Impact factor: 5.076

3.  Rashba Splitting and Electronic Valley Characteristics of Janus Sb and Bi Topological Monolayers.

Authors:  Qi Gong; Guiling Zhang
Journal:  Int J Mol Sci       Date:  2022-07-10       Impact factor: 6.208

4.  Ion slippage through Li+-centered G-quadruplex.

Authors:  Seok-Kyu Cho; Kyung Min Lee; So-Huei Kang; Kihun Jeong; Sun-Phil Han; Ji Eun Lee; Seungho Lee; Tae Joo Shin; Ja-Hyoung Ryu; Changduk Yang; Sang Kyu Kwak; Sang-Young Lee
Journal:  Sci Adv       Date:  2022-09-14       Impact factor: 14.957

5.  Preconditioners for the geometry optimisation and saddle point search of molecular systems.

Authors:  Letif Mones; Christoph Ortner; Gábor Csányi
Journal:  Sci Rep       Date:  2018-09-18       Impact factor: 4.379

  5 in total

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