Literature DB >> 27122989

MicroRNA expression profiling of sputum for the detection of early and locally advanced non-small-cell lung cancer: a prospective case-control study.

R Razzak1, E L R Bédard1, J O Kim2, S Gazala1, L Guo3, S Ghosh3, A Joy3, T Nijjar3, E Wong3, W H Roa4.   

Abstract

BACKGROUND: Non-small-cell lung cancer (nsclc) is associated with very poor overall survival because 70% of patients present with locally advanced or metastatic disease at the time of diagnosis. Micrornas (mirnas) are a class of short, noncoding rna molecules whose presence in samples of biologic fluids such as sputum has demonstrated promise as a potential means of detecting nsclc. We investigated the stage-specific nsclc detection potential of an efficient panel of 3 mirnas (mir-21, mir-210, mir-372) using a single sputum sample.
METHODS: A single spontaneously expectorated sputum sample was prospectively collected from 21 early nsclc (≤stage ii) patients, 22 advanced nsclc (≥stage iii) patients, and 10 control subjects. Mirna expression profiles were determined by quantitative real-time polymerase chain reaction and were analyzed by unsupervised hierarchical cluster analysis.
RESULTS: Mean tumour size (±95% confidence interval) in the early and advanced nsclc patients was 3.3 cm ± 0.9 cm and 4.8 cm ± 0.7 cm respectively. Adenocarcinoma constituted 61.9% of the early and 45.5% of the advanced nsclc cases respectively. In comparing the early nsclc group with the control group, the mirna panel yielded a diagnostic sensitivity of 67% and a specificity of 90.0%. For the advanced nsclc group, the mirna panel detected nsclc with a sensitivity and specificity of 64% and 100% respectively.
CONCLUSIONS: A sputum mir-21, mir-210, and mir-372 expression profile might provide a sensitive and highly specific means for detecting nsclc. Sputum mirna analysis demonstrates promise as a potential complementary screening tool.

Entities:  

Keywords:  Non-small-cell lung cancer; mirna; nsclc; rt-pcr; screening; sputum

Year:  2016        PMID: 27122989      PMCID: PMC4835003          DOI: 10.3747/co.23.2830

Source DB:  PubMed          Journal:  Curr Oncol        ISSN: 1198-0052            Impact factor:   3.677


  39 in total

1.  mRNA and microRNA quality control for RT-qPCR analysis.

Authors:  C Becker; A Hammerle-Fickinger; I Riedmaier; M W Pfaffl
Journal:  Methods       Date:  2010-01-15       Impact factor: 3.608

2.  MicroRNAs as novel biomarkers in the diagnosis of non-small cell lung cancer: a meta-analysis based on 20 studies.

Authors:  Ling Chen; Hai Jin
Journal:  Tumour Biol       Date:  2014-06-12

Review 3.  Radiation and chest CT scan examinations: what do we know?

Authors:  Asha Sarma; Marta E Heilbrun; Karen E Conner; Scott M Stevens; Scott C Woller; C Gregory Elliott
Journal:  Chest       Date:  2012-09       Impact factor: 9.410

4.  Meta-analysis of microRNA expression in lung cancer.

Authors:  Urmo Võsa; Tõnu Vooder; Raivo Kolde; Jaak Vilo; Andres Metspalu; Tarmo Annilo
Journal:  Int J Cancer       Date:  2012-12-27       Impact factor: 7.396

5.  RAS is regulated by the let-7 microRNA family.

Authors:  Steven M Johnson; Helge Grosshans; Jaclyn Shingara; Mike Byrom; Rich Jarvis; Angie Cheng; Emmanuel Labourier; Kristy L Reinert; David Brown; Frank J Slack
Journal:  Cell       Date:  2005-03-11       Impact factor: 41.582

6.  miR-372 regulates cell cycle and apoptosis of ags human gastric cancer cell line through direct regulation of LATS2.

Authors:  Wha Ja Cho; Jeong Min Shin; Jong Soo Kim; Man Ryul Lee; Ki Sung Hong; Jun-Ho Lee; Kyoung Hwa Koo; Jeong Woo Park; Kye-Seong Kim
Journal:  Mol Cells       Date:  2009-11-19       Impact factor: 5.034

7.  Sputum microRNA profiling: a novel approach for the early detection of non-small cell lung cancer.

Authors:  Wilson H Roa; Julian O Kim; Rene Razzak; Hongfei Du; Linghong Guo; Ravinder Singh; Sayf Gazala; Sunita Ghosh; Eric Wong; Anil A Joy; James Z Xing; Eric L Bedard
Journal:  Clin Invest Med       Date:  2012-10-06       Impact factor: 0.825

8.  Normalization of microRNA expression levels in quantitative RT-PCR assays: identification of suitable reference RNA targets in normal and cancerous human solid tissues.

Authors:  Heidi J Peltier; Gary J Latham
Journal:  RNA       Date:  2008-03-28       Impact factor: 4.942

9.  EGFR regulation by microRNA in lung cancer: correlation with clinical response and survival to gefitinib and EGFR expression in cell lines.

Authors:  G J Weiss; L T Bemis; E Nakajima; M Sugita; D K Birks; W A Robinson; M Varella-Garcia; P A Bunn; J Haney; B A Helfrich; H Kato; F R Hirsch; W A Franklin
Journal:  Ann Oncol       Date:  2008-02-27       Impact factor: 32.976

10.  A microRNA expression signature of human solid tumors defines cancer gene targets.

Authors:  Stefano Volinia; George A Calin; Chang-Gong Liu; Stefan Ambs; Amelia Cimmino; Fabio Petrocca; Rosa Visone; Marilena Iorio; Claudia Roldo; Manuela Ferracin; Robyn L Prueitt; Nozumu Yanaihara; Giovanni Lanza; Aldo Scarpa; Andrea Vecchione; Massimo Negrini; Curtis C Harris; Carlo M Croce
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-03       Impact factor: 11.205

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  13 in total

Review 1.  MicroRNA-21: A promising biomarker for the prognosis and diagnosis of non-small cell lung cancer.

Authors:  Wen Zheng; Juanjuan Zhao; Yijing Tao; Mengmeng Guo; Zhou Ya; Chao Chen; Nalin Qin; Jing Zheng; Junmin Luo; Lin Xu
Journal:  Oncol Lett       Date:  2018-06-15       Impact factor: 2.967

Review 2.  Discovering MicroRNA-Regulatory Modules in Multi-Dimensional Cancer Genomic Data: A Survey of Computational Methods.

Authors:  Christopher J Walsh; Pingzhao Hu; Jane Batt; Claudia C Dos Santos
Journal:  Cancer Inform       Date:  2016-10-03

Review 3.  Epithelial-to-Mesenchymal Transition and MicroRNAs in Lung Cancer.

Authors:  Antoine Legras; Nicolas Pécuchet; Sandrine Imbeaud; Karine Pallier; Audrey Didelot; Hélène Roussel; Laure Gibault; Elizabeth Fabre; Françoise Le Pimpec-Barthes; Pierre Laurent-Puig; Hélène Blons
Journal:  Cancers (Basel)       Date:  2017-08-03       Impact factor: 6.639

4.  On the performance of pre-microRNA detection algorithms.

Authors:  Müşerref Duygu Saçar Demirci; Jan Baumbach; Jens Allmer
Journal:  Nat Commun       Date:  2017-08-24       Impact factor: 14.919

5.  Clinically Correlated MicroRNAs in the Diagnosis of Non-Small Cell Lung Cancer: A Systematic Review and Meta-Analysis.

Authors:  Min Jiang; Xuelian Li; Xiaowei Quan; Xiaoying Li; Baosen Zhou
Journal:  Biomed Res Int       Date:  2018-06-28       Impact factor: 3.411

6.  Elimination of bacterial DNA during RNA isolation from sputum: Bashing bead vortexing is preferable over prolonged DNase treatment.

Authors:  Csilla Paska; Imre Barta; Orsolya Drozdovszky; Balazs Antus
Journal:  PLoS One       Date:  2019-03-28       Impact factor: 3.240

7.  MicroRNAs in sputum specimen as noninvasive biomarkers for the diagnosis of nonsmall cell lung cancer: An updated meta-analysis.

Authors:  Xiaoyun Zhang; Qian Wang; Shijie Zhang
Journal:  Medicine (Baltimore)       Date:  2019-02       Impact factor: 1.817

8.  MicroRNA-based biomarkers for diagnosis of non-small cell lung cancer (NSCLC).

Authors:  Jipei Liao; Jun Shen; Qixin Leng; Meng Qin; Min Zhan; Feng Jiang
Journal:  Thorac Cancer       Date:  2020-01-28       Impact factor: 3.500

9.  Regulatory roles of differentially expressed MicroRNAs in metabolic processes in negative Lens-induced myopia Guinea pigs.

Authors:  Dadong Guo; Meihua Ding; Xiaoli Song; Yuanyuan Sun; Guoping Li; Zonghong Li; Huixia Wei; Jianfeng Wu; Wenjun Jiang; Hongsheng Bi
Journal:  BMC Genomics       Date:  2020-01-06       Impact factor: 3.969

Review 10.  The Role of Liquid Biopsy in Early Diagnosis of Lung Cancer.

Authors:  Cláudia Freitas; Catarina Sousa; Francisco Machado; Mariana Serino; Vanessa Santos; Natália Cruz-Martins; Armando Teixeira; António Cunha; Tania Pereira; Hélder P Oliveira; José Luís Costa; Venceslau Hespanhol
Journal:  Front Oncol       Date:  2021-04-16       Impact factor: 6.244

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