Literature DB >> 27113075

5-Mercuricytosine: An Organometallic Janus Nucleobase.

Dattatraya Ukale1,2, Vaishali S Shinde2, Tuomas Lönnberg3.   

Abstract

The base-pairing properties of 5-mercuricytosine have been explored at the monomer level by NMR titrations and at the oligonucleotide level by melting temperature measurements. The NMR studies revealed a relatively high affinity for guanine, hypoxanthine, and uridine, that is, bases that are deprotonated upon coordination of Hg(II) . Within an oligonucleotide duplex, 5-mercuricytosine formed Hg(II) -mediated base pairs with thymine and guanine. In the former case, the duplex formed was as stable as the respective duplex comprising solely Watson-Crick base pairs. Based on detailed thermodynamic analysis of the melting curves, the stabilization by the Hg(II) -mediated base pairs may be attributed to a comparatively low entropic penalty of hybridization.
© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  base pair; hybridization; mercury; oligonucleotides; organometallic

Mesh:

Substances:

Year:  2016        PMID: 27113075     DOI: 10.1002/chem.201600851

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  9 in total

1.  Silver(I)-mediated base pairing in parallel-stranded DNA involving the luminescent cytosine analog 1,3-diaza-2-oxophenoxazine.

Authors:  Isabell Schönrath; Vladimir B Tsvetkov; Timofei S Zatsepin; Andrey V Aralov; Jens Müller
Journal:  J Biol Inorg Chem       Date:  2019-07-01       Impact factor: 3.358

2.  A metal-mediated base pair that discriminates between the canonical pyrimidine nucleobases.

Authors:  Biswarup Jash; Philipp Scharf; Nikolas Sandmann; Célia Fonseca Guerra; Dominik A Megger; Jens Müller
Journal:  Chem Sci       Date:  2016-10-12       Impact factor: 9.825

3.  Stable Hg(II)-mediated base pairs with a phenanthroline-derived nucleobase surrogate in antiparallel-stranded DNA.

Authors:  Biswarup Jash; Jens Müller
Journal:  J Biol Inorg Chem       Date:  2020-04-11       Impact factor: 3.358

4.  Synthesis of Organometallic Oligonucleotides through Oximation with Metalated Benzaldehydes.

Authors:  Sajal Kumar Maity; Tuomas A Lönnberg
Journal:  ACS Omega       Date:  2019-11-01

5.  Silver(I) Coordination in Silver(I)-Mediated Homo Base Pairs of 6-Pyrazolylpurine in DNA Duplexes Involves the Watson-Crick Edge.

Authors:  Daniela Escher; Jens Müller
Journal:  Chemistry       Date:  2020-10-29       Impact factor: 5.236

6.  2-Trifluoromethyl-6-mercurianiline Nucleotide, a Sensitive 19F NMR Probe for Hg(II)-mediated Base Pairing.

Authors:  Asmo Aro-Heinilä; Assi Lepistö; Antti Äärelä; Tuomas Antti Lönnberg; Pasi Virta
Journal:  J Org Chem       Date:  2021-12-14       Impact factor: 4.354

7.  Metal-mediated DNA base pairing of easily prepared 2-oxo-imidazole-4-carboxylate nucleotides.

Authors:  Lingyun Hu; Yusuke Takezawa; Mitsuhiko Shionoya
Journal:  Chem Sci       Date:  2022-03-23       Impact factor: 9.825

8.  Metal-Mediated Base Pairing of Rigid and Flexible Benzaldoxime Metallacycles.

Authors:  Sajal Maity; Madhuri Hande; Tuomas Lönnberg
Journal:  Chembiochem       Date:  2020-05-05       Impact factor: 3.164

Review 9.  Organomercury Nucleic Acids: Past, Present and Future.

Authors:  Dattatraya Ukale; Tuomas Lönnberg
Journal:  Chembiochem       Date:  2021-02-16       Impact factor: 3.164

  9 in total

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