Literature DB >> 27109895

Dynamics of human acetylcholinesterase bound to non-covalent and covalent inhibitors shedding light on changes to the water network structure.

Judith Peters1, Nicolas Martinez, Marie Trovaslet, Kévin Scannapieco, Michael Marek Koza, Patrick Masson, Florian Nachon.   

Abstract

We investigated the effects of non-covalent reversible and covalent irreversible inhibitors on human acetylcholinesterase and human butyrylcholinesterase. Remarkably a non-covalent inhibitor, Huperzine A, has almost no effect on the molecular dynamics of the protein, whereas the covalently binding nerve agent soman renders the molecular structure stiffer in its aged form. The modified movements were studied by incoherent neutron scattering on different time scales and they indicate a stabilization and stiffening of aged human acetylcholinesterase. It is not straightforward to understand the forces leading to this strong effect. In addition to the specific interactions of the adduct within the protein, some indications point towards an extensive water structure change for the aged conjugate as water Bragg peaks appeared at cryogenic temperature despite an identical initial hydration state for all samples. Such a change associated to an apparent increase in free water volume upon aging suggests higher ordering of the hydration shell that leads to the stiffening of protein. Thus, several additive contributions seem responsible for the improved flexibility or stiffening effect of the inhibitors rather than a single interaction.

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Year:  2016        PMID: 27109895     DOI: 10.1039/c6cp00280c

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  12 in total

1.  Dynamics of a family of cyan fluorescent proteins probed by incoherent neutron scattering.

Authors:  Maksym Golub; Virginia Guillon; Guillaume Gotthard; Dominik Zeller; Nicolas Martinez; Tilo Seydel; Michael M Koza; Céline Lafaye; Damien Clavel; David von Stetten; Antoine Royant; Judith Peters
Journal:  J R Soc Interface       Date:  2019-03-29       Impact factor: 4.118

2.  The effect of pH on the dynamics of natural membranes.

Authors:  M Guiral; C Neitzel; M Salvador Castell; N Martinez; M T Giudici-Orticoni; J Peters
Journal:  Eur Phys J E Soft Matter       Date:  2018-02-16       Impact factor: 1.890

3.  Dynamics Properties of Photosynthetic Microorganisms Probed by Incoherent Neutron Scattering.

Authors:  Daniela Russo; Maya Dimova Lambreva; Christiane Alba Simionesco; Pierre Sebban; Giuseppina Rea
Journal:  Biophys J       Date:  2019-04-02       Impact factor: 4.033

4.  Joint neutron/molecular dynamics vibrational spectroscopy reveals softening of HIV-1 protease upon binding of a tight inhibitor.

Authors:  Daniel W Kneller; Oksana Gerlits; Luke L Daemen; Anna Pavlova; James C Gumbart; Yongqiang Cheng; Andrey Kovalevsky
Journal:  Phys Chem Chem Phys       Date:  2022-02-09       Impact factor: 3.676

5.  Low-density lipoproteins investigated under high hydrostatic pressure by elastic incoherent neutron scattering.

Authors:  J Peters; N Martinez; B Lehofer; R Prassl
Journal:  Eur Phys J E Soft Matter       Date:  2017-07-26       Impact factor: 1.890

6.  Thermodynamics of lipid multi-lamellar vesicles in presence of sterols at high hydrostatic pressure.

Authors:  J Peters; J Marion; F J Becher; M Trapp; T Gutberlet; D J Bicout; T Heimburg
Journal:  Sci Rep       Date:  2017-11-10       Impact factor: 4.379

Review 7.  Computational Studies on Acetylcholinesterases.

Authors:  Yechun Xu; Shanmei Cheng; Joel L Sussman; Israel Silman; Hualiang Jiang
Journal:  Molecules       Date:  2017-08-10       Impact factor: 4.411

8.  The molecular dynamics of bacterial spore and the role of calcium dipicolinate in core properties at the sub-nanosecond time-scale.

Authors:  Alexandre Colas de la Noue; Francesca Natali; Fatima Fekraoui; Patrick Gervais; Nicolas Martinez; Jean-Marie Perrier-Cornet; Judith Peters
Journal:  Sci Rep       Date:  2020-05-19       Impact factor: 4.379

Review 9.  A Comprehensive Review of Cholinesterase Modeling and Simulation.

Authors:  Danna De Boer; Nguyet Nguyen; Jia Mao; Jessica Moore; Eric J Sorin
Journal:  Biomolecules       Date:  2021-04-15

10.  Water structure changes in oxime-mediated reactivation process of phosphorylated human acetylcholinesterase.

Authors:  Irina V Zueva; Sofya V Lushchekina; Patrick Masson
Journal:  Biosci Rep       Date:  2018-06-29       Impact factor: 3.840

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