Literature DB >> 27108020

In situ NMR measurement of macromolecule-bound metal ion concentrations.

Natalia Kozlyuk1, Suvrajit Sengupta1, Andrej Lupták2,3,4, Rachel W Martin5,6.   

Abstract

Many nucleic acids and proteins require divalent metal ions such as Mg(2+) and Ca(2+) for folding and function. The lipophilic alignment media frequently used as membrane mimetics also bind these divalent metals. Here we demonstrate the use of (31)P NMR spectrum of a metal ion chelator (deoxycytidine diphosphate) to measure the bound [Mg(2+)] and [Ca(2+)] in situ for several biological model systems at relatively high divalent ion concentrations (1-10 mM). This method represents a general approach to measuring divalent metal ion binding in NMR samples where the amount and type of metal ion added to the system is known.

Entities:  

Keywords:  31P NMR; Bicelles; Ca2+ dependent protein; Dickerson dodecamer; Divalent ion concentration; dCDP; βγ-Crystallin

Mesh:

Substances:

Year:  2016        PMID: 27108020     DOI: 10.1007/s10858-016-0031-3

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  29 in total

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Authors:  X Shui; L McFail-Isom; G G Hu; L D Williams
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Authors:  F J Alvarez-Leefmans; F Giraldez; S M Gamiño
Journal:  Can J Physiol Pharmacol       Date:  1987-05       Impact factor: 2.273

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Journal:  Biochemistry       Date:  2014-03-05       Impact factor: 3.162

5.  Bicelles exhibiting magnetic alignment for a broader range of temperatures: a solid-state NMR study.

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Journal:  Langmuir       Date:  2014-02-04       Impact factor: 3.882

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Journal:  Biophys J       Date:  2002-10       Impact factor: 4.033

7.  Intermolecular chelation of two serine phosphates by Ca2+ and Mg2+. A theoretical structural investigation.

Authors:  N Gresh
Journal:  Biochim Biophys Acta       Date:  1980-04-10

8.  Observation of Mg2+.ATP and uncomplexed ATP in slow exchange by 31P-NMR at high magnetic fields.

Authors:  G M Sontheimer; W Kuhn; H R Kalbitzer
Journal:  Biochem Biophys Res Commun       Date:  1986-02-13       Impact factor: 3.575

9.  Structure of a B-DNA dodecamer: conformation and dynamics.

Authors:  H R Drew; R M Wing; T Takano; C Broka; S Tanaka; K Itakura; R E Dickerson
Journal:  Proc Natl Acad Sci U S A       Date:  1981-04       Impact factor: 11.205

10.  Noninvasive 31P NMR probes of free Mg2+, MgATP, and MgADP in intact Ehrlich ascites tumor cells.

Authors:  R K Gupta; W D Yushok
Journal:  Proc Natl Acad Sci U S A       Date:  1980-05       Impact factor: 11.205

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