Literature DB >> 27107414

A field-to-desktop toolchain for X-ray CT densitometry enables tree ring analysis.

Tom De Mil1, Astrid Vannoppen2, Hans Beeckman3, Joris Van Acker4, Jan Van den Bulcke4.   

Abstract

BACKGROUND AND AIMS: Disentangling tree growth requires more than ring width data only. Densitometry is considered a valuable proxy, yet laborious wood sample preparation and lack of dedicated software limit the widespread use of density profiling for tree ring analysis. An X-ray computed tomography-based toolchain of tree increment cores is presented, which results in profile data sets suitable for visual exploration as well as density-based pattern matching.
METHODS: Two temperate (Quercus petraea, Fagus sylvatica) and one tropical species (Terminalia superba) were used for density profiling using an X-ray computed tomography facility with custom-made sample holders and dedicated processing software. KEY
RESULTS: Density-based pattern matching is developed and able to detect anomalies in ring series that can be corrected via interactive software.
CONCLUSIONS: A digital workflow allows generation of structure-corrected profiles of large sets of cores in a short time span that provide sufficient intra-annual density information for tree ring analysis. Furthermore, visual exploration of such data sets is of high value. The dated profiles can be used for high-resolution chronologies and also offer opportunities for fast screening of lesser studied tropical tree species.
© The Author 2016. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  Cross-dating; Fagus sylvatica; Quercus petraea; Terminalia superba; X-ray CT; densitometry; high-resolution chronologies; pattern matching; tree ring analysis; wood anatomy; wood density

Mesh:

Year:  2016        PMID: 27107414      PMCID: PMC4904179          DOI: 10.1093/aob/mcw063

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  15 in total

1.  High-resolution proxies for wood density variations in Terminalia superba.

Authors:  Maaike De Ridder; Jan Van den Bulcke; Dries Vansteenkiste; Denis Van Loo; Manuel Dierick; Bert Masschaele; Yoni De Witte; David Mannes; Eberhard Lehmann; Hans Beeckman; Luc Van Hoorebeke; Joris Van Acker
Journal:  Ann Bot       Date:  2010-12-03       Impact factor: 4.357

2.  Increasing carbon storage in intact African tropical forests.

Authors:  Simon L Lewis; Gabriela Lopez-Gonzalez; Bonaventure Sonké; Kofi Affum-Baffoe; Timothy R Baker; Lucas O Ojo; Oliver L Phillips; Jan M Reitsma; Lee White; James A Comiskey; Marie-Noël Djuikouo K; Corneille E N Ewango; Ted R Feldpausch; Alan C Hamilton; Manuel Gloor; Terese Hart; Annette Hladik; Jon Lloyd; Jon C Lovett; Jean-Remy Makana; Yadvinder Malhi; Frank M Mbago; Henry J Ndangalasi; Julie Peacock; Kelvin S-H Peh; Douglas Sheil; Terry Sunderland; Michael D Swaine; James Taplin; David Taylor; Sean C Thomas; Raymond Votere; Hannsjörg Wöll
Journal:  Nature       Date:  2009-02-19       Impact factor: 49.962

3.  UV-laser-based microscopic dissection of tree rings - a novel sampling tool for δ(13) C and δ(18) O studies.

Authors:  Karina Schollaen; Ingo Heinrich; Gerhard Helle
Journal:  New Phytol       Date:  2013-11-13       Impact factor: 10.151

Review 4.  Studying global change through investigation of the plastic responses of xylem anatomy in tree rings.

Authors:  Patrick Fonti; Georg von Arx; Ignacio García-González; Britta Eilmann; Ute Sass-Klaassen; Holger Gärtner; Dieter Eckstein
Journal:  New Phytol       Date:  2009-09-23       Impact factor: 10.151

5.  The importance of wood traits and hydraulic conductance for the performance and life history strategies of 42 rainforest tree species.

Authors:  Lourens Poorter; Imole McDonald; Alfredo Alarcón; Esther Fichtler; Juan-Carlos Licona; Marielos Peña-Claros; Frank Sterck; Zulma Villegas; Ute Sass-Klaassen
Journal:  New Phytol       Date:  2009-11-19       Impact factor: 10.151

6.  Ecological and evolutionary determinants of a key plant functional trait: wood density and its community-wide variation across latitude and elevation.

Authors:  Nathan G Swenson; Brian J Enquist
Journal:  Am J Bot       Date:  2007-03       Impact factor: 3.844

Review 7.  Traits, properties, and performance: how woody plants combine hydraulic and mechanical functions in a cell, tissue, or whole plant.

Authors:  Barbara Lachenbruch; Katherine A McCulloh
Journal:  New Phytol       Date:  2014-09-23       Impact factor: 10.151

8.  Drought impact on water use efficiency and intra-annual density fluctuations in Erica arborea on Elba (Italy).

Authors:  Giovanna Battipaglia; Veronica DE Micco; Willi A Brand; Matthias Saurer; Giovanna Aronne; Petra Linke; Paolo Cherubini
Journal:  Plant Cell Environ       Date:  2013-08-13       Impact factor: 7.228

9.  High-resolution densitometry and elemental analysis of tropical wood.

Authors:  Peter Hietz; Monika Horsky; Thomas Prohaska; Ingeborg Lang; Michael Grabner
Journal:  Trees (Berl West)       Date:  2014-11-27       Impact factor: 2.529

10.  Olive tree-ring problematic dating: a comparative analysis on Santorini (Greece).

Authors:  Paolo Cherubini; Turi Humbel; Hans Beeckman; Holger Gärtner; David Mannes; Charlotte Pearson; Werner Schoch; Roberto Tognetti; Simcha Lev-Yadun
Journal:  PLoS One       Date:  2013-01-28       Impact factor: 3.240

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  3 in total

1.  Asynchronous leaf and cambial phenology in a tree species of the Congo Basin requires space-time conversion of wood traits.

Authors:  Tom De Mil; Wannes Hubau; Bhély Angoboy Ilondea; Mirvia Angela Rocha Vargas; Pascal Boeckx; Kathy Steppe; Joris Van Acker; Hans Beeckman; Jan Van den Bulcke
Journal:  Ann Bot       Date:  2019-09-24       Impact factor: 4.357

2.  Advanced X-ray CT scanning can boost tree ring research for earth system sciences.

Authors:  Jan Van den Bulcke; Marijn A Boone; Jelle Dhaene; Denis Van Loo; Luc Van Hoorebeke; Matthieu N Boone; Francis Wyffels; Hans Beeckman; Joris Van Acker; Tom De Mil
Journal:  Ann Bot       Date:  2019-11-15       Impact factor: 4.357

3.  Design and Test of a Microdestructive Tree-Ring Measurement System.

Authors:  Xueyang Hu; Yili Zheng; Hao Liang; Yandong Zhao
Journal:  Sensors (Basel)       Date:  2020-06-07       Impact factor: 3.576

  3 in total

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