| Literature DB >> 27101308 |
Albert Nguyen1,2, Maya Mamarbachi1, Valérie Turcot1, Samuel Lessard1, Carol Yu1,2, Xiaoyan Luo1, Julie Lalongé1,3, Doug Hayami1,3,4, Mathieu Gayda1,3,4, Martin Juneau1,3,4, Nathalie Thorin-Trescases1, Guillaume Lettre1,4, Anil Nigam1,3,4, Eric Thorin1,5.
Abstract
DNA methylation is believed to regulate gene expression during adulthood in response to the constant changes in environment. The methylome is therefore proposed to be a biomarker of health through age. ANGPTL2 is a circulating pro-inflammatory protein that increases with age and prematurely in patients with coronary artery diseases; integrating the methylation pattern of the promoter may help differentiate age- vs. disease-related change in its expression. We believe that in a pro-inflammatory environment, ANGPTL2 is differentially methylated, regulating ANGPTL2 expression. To test this hypothesis we investigated the changes in promoter methylation of ANGPTL2 gene in leukocytes from patients suffering from post-acute coronary syndrome (ACS). DNA was extracted from circulating leukocytes of post-ACS patients with cardiovascular risk factors and from healthy young and age-matched controls. Methylation sites (CpGs) found in the ANGPTL2 gene were targeted for specific DNA methylation quantification. The functionality of ANGPTL2 methylation was assessed by an in vitro luciferase assay. In post-ACS patients, C-reactive protein and ANGPTL2 circulating levels increased significantly when compared to healthy controls. Decreased methylation of specific CpGs were found in the promoter of ANGPTL2 and allowed to discriminate age vs. disease associated methylation. In vitro DNA methylation of specific CpG lead to inhibition of ANGPTL2 promoter activity. Reduced leukocyte DNA methylation in the promoter region of ANGPTL2 is associated with the pro-inflammatory environment that characterizes patients with post-ACS differently from age-matched healthy controls. Methylation of different CpGs in ANGPTL2 gene may prove to be a reliable biomarker of coronary disease.Entities:
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Year: 2016 PMID: 27101308 PMCID: PMC4839636 DOI: 10.1371/journal.pone.0153920
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Baseline parameters of post-ACS patients.
| Post-ACS patients (n = 33) | |
|---|---|
| 62±2 | |
| 26 (79%) | |
| 16/33 (49%) | |
| 33/33 (100%) | |
| 29/33 (88%) | |
| 4/33 (21%) | |
| 21/33 (64%) | |
| 4/33 (12%) | |
| 27/33(82%) | |
| 21/33 (64%) | |
| 5/33 (15%) | |
| 19/33 (58%) | |
| Statins | 32/33 (97%) |
| Aspirin | 32/33 (97%) |
| β-blockers | 28/33 (85%) |
| Angiotensin Converting Enzyme inhibitors | 26/33 (79%) |
| Clopidogrel/Pasugrel | 24/33 (73%) |
| Nitrates | 14/33 (42%) |
| Calcium channel blockers | 2/33 (6%) |
| Angiotensin II receptor antagonists | 3/33 (9%) |
Data are mean ± SEM of n participants.
Anthropometric, hemodynamic and metabolic parameters of participants.
| Young healthy controls | n | Age-matched healthy controls | n | Post-ACS patients | n | |
|---|---|---|---|---|---|---|
| 28±1 | 20 | 61±2 (20) | 20 | 62±2 | 33 | |
| 5 | 4 | 26 | ||||
| 54.8±2.4 | 20 | 44.6±2.0 | 20 | 29.7±1.0 | 32 | |
| 21.6±0.4 | 20 | 23.8±0.5 | 20 | 28.1±0.8 | 33 | |
| 17.2±1.5 | 20 | 25.2±1.6 | 20 | 28.2±1.2 | 32 | |
| 112±3 | 19 | 118±3 | 20 | 122±3 | 33 | |
| 68±2 | 19 | 73±1 | 20 | 69±1 | 33 | |
| 67±2 | 20 | 65±2 | 20 | 65±2 | 33 | |
| 4.8±0.1 | 19 | 5.0±0.1 | 19 | 5.4±0.1 | 33 | |
| 34.7±3.3 | 19 | 38.4±3.0 | 17 | 79.2±9.4 | 33 | |
| 0.71±0.07 | 20 | 1.04±0.13 | 19 | 1.09±0.07 | 33 | |
| 4.2±0.1 | 20 | 4.8±0.2 | 19 | 3.0±0.1 | 33 | |
| 2.3±0.1 | 20 | 2.9±0.2 | 17 | 1.5±0.1 | 33 | |
| 1.6±0.1 | 20 | 1.6±0.1 | 18 | 1.0±0.1 | 33 | |
| 0.89±0.25 | 20 | 0.99±0.20 | 15 | 2.20±0.46 | 31 |
Data are mean ± SEM of (n) participants.
*: p<0.05 versus Young healthy controls,
: p<0.05 versus Age-matched controls (Kruskal-Wallis test).
BMI, Body mass index; SAP, Systolic arterial pressure; DAP, Diastolic arterial pressure; TG, Triglycerides; LDL, Low-density lipoprotein; HDL, High-density lipoprotein; CRP, C-reactive protein.
Fig 1Flowchart illustrating the "n" values between groups throughout the study.
EpiTYPER primer sequences.
ANGPTL2-specific bisulfite primers required for PCR amplification.
| Primer | Sequence |
|---|---|
| Forward | |
| Reverse |
Fig 2Increased ANGPTL2 in post-ACS patients.
Fasting ANGPTL2 levels in the plasma of patients with post-acute coronary syndrome (ACS) (n = 33) compared to age-matched (n = 20) and young (n = 20) healthy controls. Data are mean ± SEM of (n) participants, *: p<0.05 vs Age-matched controls (Kruskal-Wallis test).
Exploratory probe coordinates.
Genomic localisation of probes covering ANGPTL2 CpG sites analyzed by the Infinium HumanMethylation450 exploratory assay, as provided by the manufacturer.
| Probe ID | Coordinates |
|---|---|
| cg08076018 | chr9:128924901 |
| cg09427311 | chr9:128925551 |
| cg11213150 | chr9:128924278 |
| cg13508369 | chr9:128923847 |
| cg13662634 | chr9:128924769 |
| cg14281592 | chr9:128924134 |
Fig 3Detectable ANGPTL2 methylation profile.
Quantification of various methylation sites located in the ANGPTL2 gene identified following a preliminary genome-wide exploratory assay. DNA samples were pooled from a small number of participants taken from all three groups. Data are mean ± SEM of a total of 16 patients from the young controls (n = 4), age-matched controls (n = 7) and post-ACS patients (n = 5).
Fig 4Fine mapping of ANGPTL2 methylation profile.
Identification (CpG1-6) and localization of CpGs targeted for DNA methylation quantification. The arrow represents the CpG previously characterized by probe cg09427311 during the exploratory analysis.
Fig 5Hypomethylation of CpG5 and CpG6 in post-ACS patients.
Methylation percentage of the methylation sites (A) CpG1, (B) CpG2, (C) CpG3, (D) CpG5 and (E) CpG6, previously identified in Fig 4. DNA was isolated from leukocytes of post-ACS patients (n = 21), age-matched (n = 12) and young (n = 14) healthy controls. Box and whiskers plot of (n) participants, *: p<0.05 (Kruskal-Wallis test).
Fig 6CpG5 methylation is inversely correlated with CRP concentration.
Negative correlation between plasma CRP concentrations and CpG5 (p = 0.0096, r = -0.395, n = 42) and CpG6 (p = 0.1731, r = -0.214, n = 42) methylation in all participants (n = 14 young healthy controls, n = 9 age-matched healthy controls, n = 19 post-ACS patients).
Fig 7In vitro methylation of ANGPTL2 decreases promoter activity.
In vitro methylation of ANGPTL2 target region containing CpG5 inhibited transcriptional activity, as measured by a luciferase reporter assay. Luciferase activity of methylated (M.SssI treated) and unmethylated constructs (A) containing the CpG5 site or (B) without. The assay was repeated 3 times and data are mean ± SEM. *: p<0.05 versus unmethylated (Unpaired t-test).