| Literature DB >> 27099672 |
Hamed Kalani1, Hosein Khanahmad Shahreza2, Ahmad Daryani3, Hosein Ali Yousefi1, Nader Pestechian1, Vahid Mansouri4.
Abstract
AIM: To evaluate the effect of active T. gondii tachyzoites and its products on the gene expression level of IFN-γR1 and IFN-γR2 in a murine model.Entities:
Keywords: IFN-γR1; IFN-γR2; Toxoplasma gondii; gene expression
Year: 2016 PMID: 27099672 PMCID: PMC4833851
Source DB: PubMed Journal: Gastroenterol Hepatol Bed Bench ISSN: 2008-2258
Details of the primer sequences designed in this study
| Slope: Efficiency | Sequence | Primer | Accession number | Gene |
|---|---|---|---|---|
| -3.368: 0.976 | CCGAGCCAAGGACCAGGATA | Forward | NM_013551.2 | HMBS |
| TCAGGTACAGTTGCCCATCTTTC | Reverse | |||
| -3.342: 0.990 | CCTAAGTCCTTGCTCTCTGTGGTA | Forward | NM_010511.2 | IFN-γR1 |
| TTCTTCCTGTTCTGCTGCTTCG | Reverse | |||
| -3.361: 0.981 | TCCTCGCCAGACTCGTTT | Forward | NM_008338.3 | IFN-γR2 |
| GCCGCCTCCTGTTAAGTCA | Reverse |
HMBS has two transcript variants, the homology of which was determined by MEGA4 software before primer design
P-values of the relative gene expression level of IFN-γR1 and IFN-γR2 in the groups under study
| P-values | ||||
|---|---|---|---|---|
| TLP | ESP-CF | ESP-CC | AT | |
| IFN-γR1 | 0.04 | 0.008 | 0.32 | 0.13 |
| IFN-γR2 | 0.8 | 0.73 | 0.66 | 0.84 |
The numbers with an asterisk (*) are significant statistically relative to the control group. TLP, Toxoplasma gondii lysate products; ESP-CF, excretory/secretory products from cell free medium; ESP-CC, excretory/secretory products from cell culture medium; AT, active tachyzoites
Figure 1The relative gene expression level of IFN-γR1 and IFN-γR2 in the groups under study. The gene expression level of the columns marked with an asterisk (*) are significant statistically relative to the control group (P < 0.05). TLP, Toxoplasma gondii lysate products; ESP-CF, excretory/secretory products from cell free medium; ESP-CC, excretory/secretory products from cell culture medium; AT, active tachyzoites
The standard error of mean (SEM) for IFN-γR1 and IFN-γR2 in all of the groups
|
| Average ± SEM |
| |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| TLP | ESP-CF | ESP-CC | AT | PBS | |||||||
| IFN-R1 | IFN-R2 | IFN-γR1 | IFN-R2 | IFN-R1 | IFN-R2 | IFN-γR1 | IFN-R2 | IFN-R1 | IFN-R2 | ||
| 3.85±0.9 | 4.3±1.35 | 4.33±0.73 | 5.12±1.41 | 2.48±0.65 | 4.9±0.35 | 2.62±0.33 | 4.43±0.44 | 1.65±0.5 | 4.58±0.6 | ||
SEM was calculated for IFN-γR1 and IFN-γR2 ∆Ct in each of the groups. TLP, Toxoplasma gondii lysate products; ESP-CF, excretory/secretory products from cell free medium; ESP-CC, excretory/secretory products from cell culture medium; AT, active tachyzoite; PBS, phosphate buffered saline