Literature DB >> 27096233

A Prospective Pharmacogenomic Study of Crohn's Disease Patients during Routine Therapy with Anti-TNF-α Drug Adalimumab: Contribution of ATG5, NFKB1, and CRP Genes to Pharmacodynamic Variability.

Matjaž Deželak1, Katja Repnik1,2, Silvo Koder3, Ivan Ferkolj4, Uroš Potočnik1,2.   

Abstract

Crohn's disease is often treated with the anti-tumor necrosis factor-α drug adalimumab. However, about 20%-40% of patients do not display adequate therapeutic response. We prospectively evaluated, during a routine therapy of Crohn's disease patients, the candidate autophagy-related genes ATG12 and ATG5 and the inflammation-related genes NFKB1, NFKBIA, and CRP as potential predictors of adalimumab treatment response (pharmacodynamics). The associations of haplotypes and SNPs in these genes with response to drug therapy, biochemical parameters, and body mass were determined at baseline and after 4, 12, 20, and 30 weeks of therapy. Association analysis showed that haplotypes defined with the SNPs rs9373839 and rs510432 in ATG5 gene were significantly associated with positive response to therapy (p < 0.002). In addition, allele C and genotypes CC and CT of the rs1130864 in the CRP gene were positively associated with therapeutic response (p < 0.002). To the best of our knowledge, this is the first report that supports the association of SNPs in ATG5 and CRP genes with response to adalimumab therapy in Crohn's disease. Further study of these biological pathways in larger and independent clinical samples is warranted as novel streams of research on precision medicine and diagnostics for Crohn's disease.

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Year:  2016        PMID: 27096233     DOI: 10.1089/omi.2016.0005

Source DB:  PubMed          Journal:  OMICS        ISSN: 1536-2310


  9 in total

1.  Genetic influences on susceptibility to rheumatoid arthritis in African-Americans.

Authors:  Vincent A Laufer; Hemant K Tiwari; Richard J Reynolds; Maria I Danila; Jelai Wang; Jeffrey C Edberg; Robert P Kimberly; Leah C Kottyan; John B Harley; Ted R Mikuls; Peter K Gregersen; Devin M Absher; Carl D Langefeld; Donna K Arnett; S Louis Bridges
Journal:  Hum Mol Genet       Date:  2019-03-01       Impact factor: 6.150

2.  Production of Human ATG Proteins for Lipidation Assays.

Authors:  Y Zheng; Y Qiu; J E C Gunderson; B A Schulman
Journal:  Methods Enzymol       Date:  2016-11-11       Impact factor: 1.600

3.  Pre-Treatment Biomarkers of Anti-Tumour Necrosis Factor Therapy Response in Crohn's Disease-A Systematic Review and Gene Ontology Analysis.

Authors:  Boris Gole; Uroš Potočnik
Journal:  Cells       Date:  2019-05-28       Impact factor: 6.600

4.  Omics data integration identifies ELOVL7 and MMD gene regions as novel loci for adalimumab response in patients with Crohn's disease.

Authors:  Mario Gorenjak; Mateja Zupin; Gregor Jezernik; Pavel Skok; Uroš Potočnik
Journal:  Sci Rep       Date:  2021-03-09       Impact factor: 4.379

5.  Regionally Distinct Immune and Metabolic Transcriptional Responses in the Bovine Small Intestine and Draining Lymph Nodes During a Subclinical Mycobacterium avium subsp. paratuberculosis Infection.

Authors:  Eveline M Ibeagha-Awemu; Nathalie Bissonnette; Duy N Do; Pier-Luc Dudemaine; Mengqi Wang; Antonio Facciuolo; Philip Griebel
Journal:  Front Immunol       Date:  2021-12-15       Impact factor: 7.561

6.  Nerve growth factor inhibitor with novel-binding domain demonstrates nanomolar efficacy in both cell-based and cell-free assay systems.

Authors:  Allison E Kennedy; Corey A Laamanen; Mitchell S Ross; Rahul Vohra; Douglas R Boreham; John A Scott; Gregory M Ross
Journal:  Pharmacol Res Perspect       Date:  2017-10

Review 7.  Exploring the Role of Autophagy-Related Gene 5 (ATG5) Yields Important Insights Into Autophagy in Autoimmune/Autoinflammatory Diseases.

Authors:  Xin Ye; Xu-Jie Zhou; Hong Zhang
Journal:  Front Immunol       Date:  2018-10-17       Impact factor: 7.561

Review 8.  Pathogenic Single Nucleotide Polymorphisms on Autophagy-Related Genes.

Authors:  Isaac Tamargo-Gómez; Álvaro F Fernández; Guillermo Mariño
Journal:  Int J Mol Sci       Date:  2020-11-02       Impact factor: 5.923

9.  Atg5 knockdown induces age-dependent cardiomyopathy which can be rescued by repeated remote ischemic conditioning.

Authors:  Fangfei Wang; Quan He; Zhiqian Gao; Andrew N Redington
Journal:  Basic Res Cardiol       Date:  2021-07-28       Impact factor: 17.165

  9 in total

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