Literature DB >> 27086594

Strategic role of the ubiquitin-dependent segregase p97 (VCP or Cdc48) in DNA replication.

Kristijan Ramadan1, Swagata Halder2, Katherine Wiseman2, Bruno Vaz2.   

Abstract

Genome amplification (DNA synthesis) is one of the most demanding cellular processes in all proliferative cells. The DNA replication machinery (also known as the replisome) orchestrates genome amplification during S-phase of the cell cycle. Genetic material is particularly vulnerable to various events that can challenge the replisome during its assembly, activation (firing), progression (elongation) and disassembly from chromatin (termination). Any disturbance of the replisome leads to stalling of the DNA replication fork and firing of dormant replication origins, a process known as DNA replication stress. DNA replication stress is considered to be one of the main causes of sporadic cancers and other pathologies related to tissue degeneration and ageing. The mechanisms of replisome assembly and elongation during DNA synthesis are well understood. However, once DNA synthesis is complete, the process of replisome disassembly, and its removal from chromatin, remains unclear. In recent years, a growing body of evidence has alluded to a central role in replisome regulation for the ubiquitin-dependent protein segregase p97, also known as valosin-containing protein (VCP) in metazoans and Cdc48 in lower eukaryotes. By orchestrating the spatiotemporal turnover of the replisome, p97 plays an essential role in DNA replication. In this review, we will summarise our current knowledge about how p97 controls the replisome from replication initiation, to elongation and finally termination. We will also further examine the more recent findings concerning the role of p97 and how mutations in p97 cofactors, also known as adaptors, cause DNA replication stress induced genomic instability that leads to cancer and accelerated ageing. To our knowledge, this is the first comprehensive review concerning the mechanisms involved in the regulation of DNA replication by p97.

Entities:  

Keywords:  Ageing; Cancer; DNA replication; Human syndromes; Ubiquitin; p97

Mesh:

Substances:

Year:  2016        PMID: 27086594     DOI: 10.1007/s00412-016-0587-4

Source DB:  PubMed          Journal:  Chromosoma        ISSN: 0009-5915            Impact factor:   4.316


  142 in total

1.  Spartan/C1orf124, a reader of PCNA ubiquitylation and a regulator of UV-induced DNA damage response.

Authors:  Richard C Centore; Stephanie A Yazinski; Alice Tse; Lee Zou
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2.  Covalent and allosteric inhibitors of the ATPase VCP/p97 induce cancer cell death.

Authors:  Paola Magnaghi; Roberto D'Alessio; Barbara Valsasina; Nilla Avanzi; Simona Rizzi; Daniela Asa; Fabio Gasparri; Liviana Cozzi; Ulisse Cucchi; Christian Orrenius; Paolo Polucci; Dario Ballinari; Claudia Perrera; Antonella Leone; Giovanni Cervi; Elena Casale; Yang Xiao; Chihunt Wong; Daniel J Anderson; Arturo Galvani; Daniele Donati; Tom O'Brien; Peter K Jackson; Antonella Isacchi
Journal:  Nat Chem Biol       Date:  2013-07-28       Impact factor: 15.040

3.  Functional interaction between the Werner Syndrome protein and DNA polymerase delta.

Authors:  A S Kamath-Loeb; E Johansson; P M Burgers; L A Loeb
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-25       Impact factor: 11.205

4.  Bortezomib-based therapy for newly diagnosed mantle-cell lymphoma.

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Journal:  N Engl J Med       Date:  2015-03-05       Impact factor: 91.245

Review 5.  FAS-associated factor 1 (FAF1): diverse functions and implications for oncogenesis.

Authors:  Craig W Menges; Deborah A Altomare; Joseph R Testa
Journal:  Cell Cycle       Date:  2009-08-16       Impact factor: 4.534

6.  DNA-protein crosslink repair: proteases as DNA repair enzymes.

Authors:  Julian Stingele; Bianca Habermann; Stefan Jentsch
Journal:  Trends Biochem Sci       Date:  2014-12-09       Impact factor: 13.807

7.  DVC1 (C1orf124) recruits the p97 protein segregase to sites of DNA damage.

Authors:  Emily J Davis; Christophe Lachaud; Paul Appleton; Thomas J Macartney; Inke Näthke; John Rouse
Journal:  Nat Struct Mol Biol       Date:  2012-10-07       Impact factor: 15.369

Review 8.  Control of DNA replication licensing in a cell cycle.

Authors:  Hideo Nishitani; Zoi Lygerou
Journal:  Genes Cells       Date:  2002-06       Impact factor: 1.891

9.  Werner syndrome protein directly binds to the AAA ATPase p97/VCP in an ATP-dependent fashion.

Authors:  Fred Eliezer Indig; Juneth Joaquin Partridge; Cayetano von Kobbe; Mirit I Aladjem; Martin Latterich; Vilhelm A Bohr
Journal:  J Struct Biol       Date:  2004 Apr-May       Impact factor: 2.867

10.  Mutations in SPRTN cause early onset hepatocellular carcinoma, genomic instability and progeroid features.

Authors:  Davor Lessel; Bruno Vaz; Swagata Halder; Paul J Lockhart; Ivana Marinovic-Terzic; Jaime Lopez-Mosqueda; Melanie Philipp; Joe C H Sim; Katherine R Smith; Judith Oehler; Elisa Cabrera; Raimundo Freire; Kate Pope; Amsha Nahid; Fiona Norris; Richard J Leventer; Martin B Delatycki; Gotthold Barbi; Simon von Ameln; Josef Högel; Marina Degoricija; Regina Fertig; Martin D Burkhalter; Kay Hofmann; Holger Thiele; Janine Altmüller; Gudrun Nürnberg; Peter Nürnberg; Melanie Bahlo; George M Martin; Cora M Aalfs; Junko Oshima; Janos Terzic; David J Amor; Ivan Dikic; Kristijan Ramadan; Christian Kubisch
Journal:  Nat Genet       Date:  2014-09-28       Impact factor: 38.330

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  18 in total

Review 1.  Preparation for DNA replication: the key to a successful S phase.

Authors:  Juanita C Limas; Jeanette Gowen Cook
Journal:  FEBS Lett       Date:  2019-10-15       Impact factor: 4.124

Review 2.  Proteolytic control of genome integrity at the replication fork.

Authors:  Julie Rageul; Alexandra S Weinheimer; Jennifer J Park; Hyungjin Kim
Journal:  DNA Repair (Amst)       Date:  2019-07-10

Review 3.  Proteasome-mediated degradation of tyrosine hydroxylase triggered by its phosphorylation: a new question as to the intracellular location at which the degradation occurs.

Authors:  Akira Nakashima; Yu Kodani; Yoko S Kaneko; Hiroshi Nagasaki; Akira Ota
Journal:  J Neural Transm (Vienna)       Date:  2016-11-19       Impact factor: 3.575

4.  Host AAA+ ATPase TER94 Plays Critical Roles in Building the Baculovirus Viral Replication Factory and Virion Morphogenesis.

Authors:  Yimeng Li; Liangbo Hu; Tong Chen; Meng Chang; Fei Deng; Zhihong Hu; Hualin Wang; Manli Wang
Journal:  J Virol       Date:  2020-02-28       Impact factor: 5.103

5.  Metalloprotease SPRTN/DVC1 Orchestrates Replication-Coupled DNA-Protein Crosslink Repair.

Authors:  Bruno Vaz; Marta Popovic; Joseph A Newman; John Fielden; Hazel Aitkenhead; Swagata Halder; Abhay Narayan Singh; Iolanda Vendrell; Roman Fischer; Ignacio Torrecilla; Neele Drobnitzky; Raimundo Freire; David J Amor; Paul J Lockhart; Benedikt M Kessler; Gillies W McKenna; Opher Gileadi; Kristijan Ramadan
Journal:  Mol Cell       Date:  2016-10-27       Impact factor: 17.970

6.  PCNA-Dependent Cleavage and Degradation of SDE2 Regulates Response to Replication Stress.

Authors:  Ukhyun Jo; Winson Cai; Jingming Wang; Yoojin Kwon; Alan D D'Andrea; Hyungjin Kim
Journal:  PLoS Genet       Date:  2016-12-01       Impact factor: 5.917

Review 7.  The role of ubiquitin-dependent segregase p97 (VCP or Cdc48) in chromatin dynamics after DNA double strand breaks.

Authors:  Ignacio Torrecilla; Judith Oehler; Kristijan Ramadan
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-10-05       Impact factor: 6.237

8.  Two paths to let the replisome go.

Authors:  Vincenzo D'Angiolella; Daniele Guardavaccaro
Journal:  Cell Death Differ       Date:  2017-05-19       Impact factor: 15.828

9.  CUL-2LRR-1 and UBXN-3 drive replisome disassembly during DNA replication termination and mitosis.

Authors:  Remi Sonneville; Sara Priego Moreno; Axel Knebel; Clare Johnson; C James Hastie; Anton Gartner; Agnieszka Gambus; Karim Labib
Journal:  Nat Cell Biol       Date:  2017-04-03       Impact factor: 28.824

10.  RNAi-Based Suppressor Screens Reveal Genetic Interactions Between the CRL2LRR-1 E3-Ligase and the DNA Replication Machinery in Caenorhabditis elegans.

Authors:  Batool Ossareh-Nazari; Anthi Katsiarimpa; Jorge Merlet; Lionel Pintard
Journal:  G3 (Bethesda)       Date:  2016-10-13       Impact factor: 3.154

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