Literature DB >> 27085421

An extended loop in CE7 carbohydrate esterase family is dispensable for oligomerization but required for activity and thermostability.

Mrityunjay K Singh1, Narayanan Manoj2.   

Abstract

The carbohydrate esterase family 7 (CE7) belonging to the α/β hydrolase superfamily contains a structurally conserved loop extension element relative to the canonical α/β hydrolase fold. This element called the β-interface loop contributes 20-30% of the total buried surface area at intersubunit interfaces of the functional hexameric state. To test whether this loop is an enabling region for the structure and function of the oligomeric assembly, we designed a truncation variant of the thermostable CE7 acetyl esterase from Thermotoga maritima (TmAcE). Although deletion of 26 out of 40 residues in the loop had little impact on the hexamer formation, the variant exhibited altered dynamics of the oligomeric assembly and a loss of thermal stability. Furthermore, the mutant lacked catalytic activity. Crystal structures of the variant and a new crystal form of the wild type protein determined at 2.75Å and 1.76Å, respectively, provide a rationale for the properties of the variant. The hexameric assembly in the variant is identical to that of the wild type and differed only in the lack of buried surface area interactions at the original intersubunit interfaces. This is accompanied by disorder in an extended region of the truncated loop that consequently induces disorder in the neighboring oxyanion hole loop. Overall, the results suggest that the β-interface loop in CE7 enzymes is dispensable for the oligomeric assembly. Rather, the loop extension event was evolutionarily selected to regulate activity, conformational flexibility and thermal stability.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Carbohydrate esterase family 7; Crystal structure; Intersubunit interface; Loop truncation; Thermotoga maritima acetyl esterase

Mesh:

Substances:

Year:  2016        PMID: 27085421     DOI: 10.1016/j.jsb.2016.04.008

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  2 in total

1.  Structural Characterization and Directed Evolution of a Novel Acetyl Xylan Esterase Reveals Thermostability Determinants of the Carbohydrate Esterase 7 Family.

Authors:  Fiyinfoluwa A Adesioye; Thulani P Makhalanyane; Surendra Vikram; Bryan T Sewell; Wolf-Dieter Schubert; Don A Cowan
Journal:  Appl Environ Microbiol       Date:  2018-04-02       Impact factor: 4.792

2.  Crystal structure and functional characterization of a cold-active acetyl xylan esterase (PbAcE) from psychrophilic soil microbe Paenibacillus sp.

Authors:  Sun-Ha Park; Wanki Yoo; Chang Woo Lee; Chang Sook Jeong; Seung Chul Shin; Han-Woo Kim; Hyun Park; Kyeong Kyu Kim; T Doohun Kim; Jun Hyuck Lee
Journal:  PLoS One       Date:  2018-10-31       Impact factor: 3.240

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.