Literature DB >> 27084448

Crystal structure of human PCNA in complex with the PIP box of DVC1.

Yong Wang1, Min Xu2, Tao Jiang3.   

Abstract

In higher eukaryotes, DVC1 (SPRTN, Spartan or C1orf124) is implicated in the translesion synthesis (TLS) pathway. DVC1 localizes to sites of DNA damage, binds to the proliferating cell nuclear antigen (PCNA) via its conserved PCNA-interacting motif (PIP box), and associates with ubiquitin selective segregase p97 and other factors, thus regulating translesion synthesis polymerases. Here, we report the crystal structure of human PCNA in complex with a peptide ((321)SNSHQNVLSNYFPRVS(336)) derived from human DVC1 that contains a unique YF type PIP box. Structural analysis reveals the detailed PIP box-PCNA interaction. Interestingly, substitution of Y331 with Phe severely reduces its PCNA binding affinity. These findings offer new insights into the determinants of PIP box for PCNA binding.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  DVC1; PCNA; PIP box; SPRTN; Structure

Mesh:

Substances:

Year:  2016        PMID: 27084448     DOI: 10.1016/j.bbrc.2016.04.053

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  8 in total

1.  The p12 subunit of human polymerase δ uses an atypical PIP box for molecular recognition of proliferating cell nuclear antigen (PCNA).

Authors:  Amaia Gonzalez-Magaña; Alain Ibáñez de Opakua; Miguel Romano-Moreno; Javier Murciano-Calles; Nekane Merino; Irene Luque; Adriana L Rojas; Silvia Onesti; Francisco J Blanco; Alfredo De Biasio
Journal:  J Biol Chem       Date:  2019-01-17       Impact factor: 5.157

Review 2.  Mechanisms and Regulation of DNA-Protein Crosslink Repair During DNA Replication by SPRTN Protease.

Authors:  Megan Perry; Gargi Ghosal
Journal:  Front Mol Biosci       Date:  2022-06-15

3.  Structure of proliferating cell nuclear antigen (PCNA) bound to an APIM peptide reveals the universality of PCNA interaction.

Authors:  Kodai Hara; Masayuki Uchida; Risa Tagata; Hideshi Yokoyama; Yoshinobu Ishikawa; Asami Hishiki; Hiroshi Hashimoto
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2018-03-22       Impact factor: 1.056

4.  PCNA dependent cellular activities tolerate dramatic perturbations in PCNA client interactions.

Authors:  Rosemary H C Wilson; Antonio J Biasutto; Lihao Wang; Roman Fischer; Emma L Baple; Andrew H Crosby; Erika J Mancini; Catherine M Green
Journal:  DNA Repair (Amst)       Date:  2016-12-31

Review 5.  Behaviour of intrinsically disordered proteins in protein-protein complexes with an emphasis on fuzziness.

Authors:  Johan G Olsen; Kaare Teilum; Birthe B Kragelund
Journal:  Cell Mol Life Sci       Date:  2017-06-08       Impact factor: 9.261

Review 6.  Maneuvers on PCNA Rings during DNA Replication and Repair.

Authors:  Dea Slade
Journal:  Genes (Basel)       Date:  2018-08-17       Impact factor: 4.096

Review 7.  Human PCNA Structure, Function and Interactions.

Authors:  Amaia González-Magaña; Francisco J Blanco
Journal:  Biomolecules       Date:  2020-04-08

8.  Prot2Prot: a deep learning model for rapid, photorealistic macromolecular visualization.

Authors:  Jacob D Durrant
Journal:  J Comput Aided Mol Des       Date:  2022-08-26       Impact factor: 4.179

  8 in total

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