Literature DB >> 27083572

Isolation of an unusual G26P[13] group A rotavirus strain from piglets with diarrhea in Brazil.

Elis Lorenzetti1,2, Alice Fernandes Alfieri1,2, Amauri Alcindo Alfieri3,4.   

Abstract

This report describes the identification of an unusual G26P[13] genotype combination in a porcine group A rotavirus (RVA) strain. In a retrospective study, the VP7 (G type) and VP4 (P type) genes of porcine RVA Brazilian field strains identified in two diarrheic suckling piglets were amplified by RT-PCR and subjected to sequencing. The sequence analysis revealed the G26P[13] RVA genotype in one strain (BRA381) and G26P[X] in the other (BRA382). This study presents evidence of porcine RVA G26 genotype circulating in a Brazilian pig herd.

Entities:  

Keywords:  Diarrhea; G26 genotype; Piglet; RVA

Mesh：

Year:  2016        PMID： 27083572     DOI： 10.1007/s11262-016-1336-8

Source DB:  PubMed          Journal:  Virus Genes        ISSN： 0920-8569            Impact factor:   2.332


  27 in total

1.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

2.  Rotavirus genotypes in sewage treatment plants and in children hospitalized with acute diarrhea in Italy in 2010 and 2011.

Authors:  Franco M Ruggeri; Paolo Bonomo; Giovanni Ianiro; Andrea Battistone; Roberto Delogu; Cinzia Germinario; Maria Chironna; Maria Triassi; Rosalba Campagnuolo; Antonella Cicala; Giovanni M Giammanco; Paolo Castiglia; Caterina Serra; Andrea Gaggioli; Lucia Fiore
Journal:  Appl Environ Microbiol       Date:  2014-10-24       Impact factor: 4.792

3.  Comparative sequence analysis of VP4s from five Australian porcine rotaviruses: implication of an apparent new P type.

Authors:  J A Huang; H S Nagesha; I H Holmes
Journal:  Virology       Date:  1993-09       Impact factor: 3.616

4.  Evidence for independent segregation of the VP6- and NSP4- encoding genes in porcine group A rotavirus G6P[13] strains.

Authors:  S Ghosh; V Varghese; S Samajdar; S K Bhattacharya; N Kobayashi; T N Naik
Journal:  Arch Virol       Date:  2006-09-28       Impact factor: 2.574

5.  Genetic heterogeneity of wild-type G4P[6] porcine rotavirus strains detected in a diarrhea outbreak in a regularly vaccinated pig herd.

Authors:  Elis Lorenzetti; Thais Neris da Silva Medeiros; Alice Fernandes Alfieri; Amauri Alcindo Alfieri
Journal:  Vet Microbiol       Date:  2011-07-01       Impact factor: 3.293

6.  Analysis of the excretion dynamics and genotypic characteristics of rotavirus A during the lives of pigs raised on farms for meat production.

Authors:  Ayako Miyazaki; Kazufumi Kuga; Tohru Suzuki; Hiroshi Tsunemitsu
Journal:  J Clin Microbiol       Date:  2012-04-04       Impact factor: 5.948

7.  Multiple combinations of P[13]-like genotype with G3, G4, and G5 in porcine rotaviruses.

Authors:  Wisoot Chan-It; Pattara Khamrin; Prayuth Saekhow; Chansom Pantip; Aksara Thongprachum; Supatra Peerakome; Hiroshi Ushijima; Niwat Maneekarn
Journal:  J Clin Microbiol       Date:  2008-01-30       Impact factor: 5.948

8.  Full genome-based classification of rotaviruses reveals a common origin between human Wa-Like and porcine rotavirus strains and human DS-1-like and bovine rotavirus strains.

Authors:  Jelle Matthijnssens; Max Ciarlet; Erica Heiman; Ingrid Arijs; Thomas Delbeke; Sarah M McDonald; Enzo A Palombo; Miren Iturriza-Gómara; Piet Maes; John T Patton; Mustafizur Rahman; Marc Van Ranst
Journal:  J Virol       Date:  2008-01-23       Impact factor: 5.103

9.  Phylogenetic analyses of the VP4 and VP7 genes of porcine group A rotaviruses in Sao Paulo State, Brazil: first identification of G5P[23] in piglets.

Authors:  Paloma O Tonietti; Aline S Hora; Fernanda D F Silva; Vera L A Ruiz; Fabio Gregori
Journal:  J Clin Microbiol       Date:  2013-06-12       Impact factor: 5.948

10.  Frequency of group A rotavirus in diarrhoeic calves in Brazilian cattle herds, 1998-2002.

Authors:  A A Alfieri; M E Parazzi; E Takiuchi; K C Médici; A F Alfieri
Journal:  Trop Anim Health Prod       Date:  2006 Oct-Nov       Impact factor: 1.559
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