Literature DB >> 27083349

Physical characterization and in silico modeling of inulin polymer conformation during vaccine adjuvant particle formation.

Thomas G Barclay1, Harinda Rajapaksha2, Alagu Thilagam3, Gujie Qian4, Milena Ginic-Markovic5, Peter D Cooper6, Andrea Gerson7, Nikolai Petrovsky8.   

Abstract

This study combined physical data from synchrotron SAXS, FTIR and microscopy with in-silico molecular structure predictions and mathematical modeling to examine inulin adjuvant particle formation and structure. The results show that inulin polymer chains adopt swollen random coil in solution. As precipitation occurs from solution, interactions between the glucose end group of one chain and a fructose group of an adjacent chain help drive organized assembly, initially forming inulin ribbons with helical organization of the chains orthogonal to the long-axis of the ribbon. Subsequent aggregation of the ribbons results in the layered semicrystalline particles previously shown to act as potent vaccine adjuvants. γ-Inulin adjuvant particles consist of crystalline layers 8.5 nm thick comprising helically organized inulin chains orthogonal to the plane of the layer. These crystalline layers alternate with amorphous layers 2.4 nm thick, to give overall particle crystallinity of 78%.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Adjuvant; FTIR; Inulin; Inulin from chicory (PubChem CID: 16219508); Modeling; Polysaccharide; SAXS

Mesh:

Substances:

Year:  2016        PMID: 27083349      PMCID: PMC4834147          DOI: 10.1016/j.carbpol.2016.01.062

Source DB:  PubMed          Journal:  Carbohydr Polym        ISSN: 0144-8617            Impact factor:   9.381


  27 in total

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Journal:  Proteins       Date:  2002-05-15

2.  Studies on the conformational aspects of inulin oligomers.

Authors:  M Oka; N Ota; Y Mino; T Iwashita; H Komura
Journal:  Chem Pharm Bull (Tokyo)       Date:  1992-05       Impact factor: 1.645

Review 3.  Inulin-derived adjuvants efficiently promote both Th1 and Th2 immune responses.

Authors:  Diego G Silva; Peter D Cooper; Nikolai Petrovsky
Journal:  Immunol Cell Biol       Date:  2004-12       Impact factor: 5.126

4.  Comparison of multiple Amber force fields and development of improved protein backbone parameters.

Authors:  Viktor Hornak; Robert Abel; Asim Okur; Bentley Strockbine; Adrian Roitberg; Carlos Simmerling
Journal:  Proteins       Date:  2006-11-15

5.  Molecular dynamics simulation of confined fluids in isosurface-isothermal-isobaric ensemble.

Authors:  Hossein Eslami; Farkhondeh Mozaffari; Jalil Moghadasi; Florian Müller-Plathe
Journal:  J Chem Phys       Date:  2008-11-21       Impact factor: 3.488

6.  Convergence and error estimation in free energy calculations using the weighted histogram analysis method.

Authors:  Fangqiang Zhu; Gerhard Hummer
Journal:  J Comput Chem       Date:  2011-11-23       Impact factor: 3.376

7.  Staggered Mesh Ewald: An extension of the Smooth Particle-Mesh Ewald method adding great versatility.

Authors:  David S Cerutti; Robert E Duke; Thomas A Darden; Terry P Lybrand
Journal:  J Chem Theory Comput       Date:  2009-09-08       Impact factor: 6.006

8.  Randomized clinical trial of immunogenicity and safety of a recombinant H1N1/2009 pandemic influenza vaccine containing Advax™ polysaccharide adjuvant.

Authors:  David L Gordon; Dimitar Sajkov; Richard J Woodman; Yoshikazu Honda-Okubo; Manon M J Cox; Susanne Heinzel; Nikolai Petrovsky
Journal:  Vaccine       Date:  2012-06-17       Impact factor: 3.641

9.  Gamma ray sterilization of delta inulin adjuvant particles (Advax™) makes minor, partly reversible structural changes without affecting adjuvant activity.

Authors:  P D Cooper; T G Barclay; M Ginic-Markovic; N Petrovsky
Journal:  Vaccine       Date:  2013-12-14       Impact factor: 3.641

10.  ACPYPE - AnteChamber PYthon Parser interfacE.

Authors:  Alan W Sousa da Silva; Wim F Vranken
Journal:  BMC Res Notes       Date:  2012-07-23
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  6 in total

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Journal:  Int J Mol Sci       Date:  2018-01-03       Impact factor: 5.923

2.  Panblok-H1+advax H1N1/2009pdm vaccine: Insights into rapid development of a delta inulin adjuvanted recombinant pandemic influenza vaccine.

Authors:  Yoshikazu Honda-Okubo; Harinda Rajapaksha; Dimitar Sajkov; David Gordon; Manon M J Cox; Nikolai Petrovsky
Journal:  Hum Vaccin Immunother       Date:  2017-02-14       Impact factor: 3.452

3.  Influence of Oxidation Degree on the Physicochemical Properties of Oxidized Inulin.

Authors:  Franklin Afinjuomo; Paris Fouladian; Thomas G Barclay; Yunmei Song; Nikolai Petrovsky; Sanjay Garg
Journal:  Polymers (Basel)       Date:  2020-05-01       Impact factor: 4.329

4.  Randomized controlled trial demonstrating the benefits of delta inulin adjuvanted immunotherapy in patients with bee venom allergy.

Authors:  Robert Heddle; Anthony Smith; Richard Woodman; Pravin Hissaria; Nikolai Petrovsky
Journal:  J Allergy Clin Immunol       Date:  2019-07-09       Impact factor: 10.793

5.  Doxorubicin-Loaded Delta Inulin Conjugates for Controlled and Targeted Drug Delivery: Development, Characterization, and In Vitro Evaluation.

Authors:  Lixin Wang; Yunmei Song; Ankit Parikh; Paul Joyce; Rosa Chung; Liang Liu; Franklin Afinjuomo; John D Hayball; Nikolai Petrovsky; Thomas G Barclay; Sanjay Garg
Journal:  Pharmaceutics       Date:  2019-11-06       Impact factor: 6.321

6.  Synthesis and Characterization of pH-Sensitive Inulin Conjugate of Isoniazid for Monocyte-Targeted Delivery.

Authors:  Franklin Afinjuomo; Thomas G Barclay; Ankit Parikh; Rosa Chung; Yunmei Song; Gayathri Nagalingam; Jamie Triccas; Lixin Wang; Liang Liu; John D Hayball; Nikolai Petrovsky; Sanjay Garg
Journal:  Pharmaceutics       Date:  2019-10-28       Impact factor: 6.321

  6 in total

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