Literature DB >> 27081857

Two asian jumbo phages, ϕRSL2 and ϕRSF1, infect Ralstonia solanacearum and show common features of ϕKZ-related phages.

Anjana Bhunchoth1, Romain Blanc-Mathieu2, Tomoko Mihara2, Yosuke Nishimura2, Ahmed Askora3, Namthip Phironrit4, Chalida Leksomboon5, Orawan Chatchawankanphanich4, Takeru Kawasaki6, Miyako Nakano6, Makoto Fujie6, Hiroyuki Ogata7, Takashi Yamada8.   

Abstract

Jumbo phages infecting Ralstonia solanacearum were isolated in Thailand (ϕRSL2) and Japan (ϕRSF1). They were similar regarding virion morphology, genomic arrangement, and host range. Phylogenetic and proteomic tree analyses demonstrate that the ϕRSL2 and ϕRSF1 belong to a group of evolutionary related phages, including Pseudomonas phages ϕKZ, 201ϕ2-1 and all previously described ϕKZ-related phages. Despite conserved genomic co-linearity between the ϕRSL2 and ϕRSF1, they differ in protein separation patterns. A major difference was seen in the detection of virion-associated-RNA polymerase subunits. All β- and β'-subunits were detected in ϕRSF1, but one β'-subunit was undetected in ϕRSL2. Furthermore, ϕRSF1 infected host cells faster (latent period: 60 and 150min for ϕRSF1 and ϕRSL2, respectively) and more efficiently than ϕRSL2. Therefore, the difference in virion-associated-RNA polymerase may affect infection efficiency. Finally, we show that ϕRSF1 is able to inhibit bacterial wilt progression in tomato plants.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Genomic analysis; Jumbo phages; Ralstonia solanacearum; Virion-associated-RNA polymerase; ϕKZ-like phages

Mesh:

Year:  2016        PMID: 27081857     DOI: 10.1016/j.virol.2016.03.028

Source DB:  PubMed          Journal:  Virology        ISSN: 0042-6822            Impact factor:   3.616


  17 in total

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Authors:  Kai Wang; Dawei Chen; Quanrong Liu; Pengfei Zhu; Ming Sun; Donghai Peng
Journal:  Curr Microbiol       Date:  2022-07-14       Impact factor: 2.343

2.  Environmental Viral Genomes Shed New Light on Virus-Host Interactions in the Ocean.

Authors:  Yosuke Nishimura; Hiroyasu Watai; Takashi Honda; Tomoko Mihara; Kimiho Omae; Simon Roux; Romain Blanc-Mathieu; Keigo Yamamoto; Pascal Hingamp; Yoshihiko Sako; Matthew B Sullivan; Susumu Goto; Hiroyuki Ogata; Takashi Yoshida
Journal:  mSphere       Date:  2017-03-01       Impact factor: 4.389

3.  A non-canonical multisubunit RNA polymerase encoded by the AR9 phage recognizes the template strand of its uracil-containing promoters.

Authors:  Maria Sokolova; Sergei Borukhov; Daria Lavysh; Tatjana Artamonova; Mikhail Khodorkovskii; Konstantin Severinov
Journal:  Nucleic Acids Res       Date:  2017-06-02       Impact factor: 16.971

4.  Replications of Two Closely Related Groups of Jumbo Phages Show Different Level of Dependence on Host-encoded RNA Polymerase.

Authors:  Takeru Matsui; Genki Yoshikawa; Tomoko Mihara; Orawan Chatchawankanphanich; Takeru Kawasaki; Miyako Nakano; Makoto Fujie; Hiroyuki Ogata; Takashi Yamada
Journal:  Front Microbiol       Date:  2017-06-13       Impact factor: 5.640

5.  Jumbo Bacteriophages: An Overview.

Authors:  Yihui Yuan; Meiying Gao
Journal:  Front Microbiol       Date:  2017-03-14       Impact factor: 5.640

6.  Transcription Profiling of Bacillus subtilis Cells Infected with AR9, a Giant Phage Encoding Two Multisubunit RNA Polymerases.

Authors:  Daria Lavysh; Maria Sokolova; Marina Slashcheva; Konrad U Förstner; Konstantin Severinov
Journal:  MBio       Date:  2017-02-14       Impact factor: 7.867

7.  To Be or Not To Be T4: Evidence of a Complex Evolutionary Pathway of Head Structure and Assembly in Giant Salmonella Virus SPN3US.

Authors:  Bazla Ali; Maxim I Desmond; Sara A Mallory; Andrea D Benítez; Larry J Buckley; Susan T Weintraub; Michael V Osier; Lindsay W Black; Julie A Thomas
Journal:  Front Microbiol       Date:  2017-11-15       Impact factor: 5.640

8.  Therapeutic Potential of a New Jumbo Phage That Infects Vibrio coralliilyticus, a Widespread Coral Pathogen.

Authors:  Loïc Jacquemot; Yvan Bettarel; Joanne Monjol; Erwan Corre; Sébastien Halary; Christelle Desnues; Thierry Bouvier; Christine Ferrier-Pagès; Anne-Claire Baudoux
Journal:  Front Microbiol       Date:  2018-10-24       Impact factor: 5.640

9.  Isolation and characterisation of pVa-21, a giant bacteriophage with anti-biofilm potential against Vibrio alginolyticus.

Authors:  Sang Guen Kim; Jin Woo Jun; Sib Sankar Giri; Saekil Yun; Hyoun Joong Kim; Sang Wha Kim; Jeong Woo Kang; Se Jin Han; Dalsang Jeong; Se Chang Park
Journal:  Sci Rep       Date:  2019-04-18       Impact factor: 4.379

10.  Xanthomonas citri jumbo phage XacN1 exhibits a wide host range and high complement of tRNA genes.

Authors:  Genki Yoshikawa; Ahmed Askora; Romain Blanc-Mathieu; Takeru Kawasaki; Yanze Li; Miyako Nakano; Hiroyuki Ogata; Takashi Yamada
Journal:  Sci Rep       Date:  2018-03-14       Impact factor: 4.379

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