Literature DB >> 27078679

Avoiding Fluorescence Assay Interference-The Case for Diaphorase.

Matthew D Hall1, Anton Simeonov1, Mindy I Davis1.   

Abstract

Fluorescence is utilized as the output for a range of assay formats used in high-throughput screening (HTS). Interference with these assays from the compounds in libraries utilized in HTS is a well-recognized phenomenon, particularly for assays relying on UV excitation such as for direct detection of the oxidoreductase cofactors NADH or NADPH. In this study, we discuss these interference challenges and highlight the specific case of the diaphorase/resazurin system that can be coupled to enzymes utilizing NADH or NADPH. We review the utilization of this assay system in the literature and argue that the diaphorase/resazurin system is underutilized in assay development. It is the authors' hope that this Perspective and the accompanying Technical Brief in this issue will stimulate interest in a robust and sensitive coupling system to avoid assay fluorescence interference.

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Year:  2016        PMID: 27078679      PMCID: PMC4840916          DOI: 10.1089/adt.2016.707

Source DB:  PubMed          Journal:  Assay Drug Dev Technol        ISSN: 1540-658X            Impact factor:   1.738


  26 in total

1.  FLUOROMETRIC PROCEDURE FOR MEASURING THE ACTIVITY OF DEHYDROGENASES.

Authors:  G G GUILBAULT; D N KRAMER
Journal:  Anal Chem       Date:  1965-09       Impact factor: 6.986

2.  The fluorometric measurement of pyridine nucleotides.

Authors:  O H LOWRY; N R ROBERTS; J I KAPPHAHN
Journal:  J Biol Chem       Date:  1957-02       Impact factor: 5.157

3.  Quantitative high-throughput screening: a titration-based approach that efficiently identifies biological activities in large chemical libraries.

Authors:  James Inglese; Douglas S Auld; Ajit Jadhav; Ronald L Johnson; Anton Simeonov; Adam Yasgar; Wei Zheng; Christopher P Austin
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-24       Impact factor: 11.205

4.  Fluorescence spectroscopic profiling of compound libraries.

Authors:  Anton Simeonov; Ajit Jadhav; Craig J Thomas; Yuhong Wang; Ruili Huang; Noel T Southall; Paul Shinn; Jeremy Smith; Christopher P Austin; Douglas S Auld; James Inglese
Journal:  J Med Chem       Date:  2008-03-26       Impact factor: 7.446

5.  A fluorescence-based coupling reaction for monitoring the activity of recombinant human NAD synthetase.

Authors:  Michael E Bembenek; Eric Kuhn; William D Mallender; Lester Pullen; Ping Li; Thomas Parsons
Journal:  Assay Drug Dev Technol       Date:  2005-10       Impact factor: 1.738

6.  Discovery of a potential allosteric ligand binding site in CDK2.

Authors:  Stephane Betzi; Riazul Alam; Mathew Martin; Donna J Lubbers; Huijong Han; Sudhakar R Jakkaraj; Gunda I Georg; Ernst Schönbrunn
Journal:  ACS Chem Biol       Date:  2011-02-22       Impact factor: 5.100

Review 7.  Advances in research on DT-diaphorase--catalytic properties, regulation of activity and significance in the detoxication of foreign compounds.

Authors:  S Horie
Journal:  Kitasato Arch Exp Med       Date:  1990-04

8.  Quantitative analyses of aggregation, autofluorescence, and reactivity artifacts in a screen for inhibitors of a thiol protease.

Authors:  Ajit Jadhav; Rafaela S Ferreira; Carleen Klumpp; Bryan T Mott; Christopher P Austin; James Inglese; Craig J Thomas; David J Maloney; Brian K Shoichet; Anton Simeonov
Journal:  J Med Chem       Date:  2010-01-14       Impact factor: 7.446

9.  Quantification of the vitamin D receptor-coregulator interaction.

Authors:  Arnaud Teichert; Leggy A Arnold; Steve Otieno; Yuko Oda; Indre Augustinaite; Tim R Geistlinger; Richard W Kriwacki; R Kiplin Guy; Daniel D Bikle
Journal:  Biochemistry       Date:  2009-02-24       Impact factor: 3.162

10.  Characterization of chemical libraries for luciferase inhibitory activity.

Authors:  Douglas S Auld; Noel T Southall; Ajit Jadhav; Ronald L Johnson; David J Diller; Anton Simeonov; Christopher P Austin; James Inglese
Journal:  J Med Chem       Date:  2008-03-26       Impact factor: 7.446

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  9 in total

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Authors:  Ben Wang; Yabin Zhang; Li Zhang
Journal:  Quant Imaging Med Surg       Date:  2018-06

Review 2.  Small-Molecule Screens: A Gateway to Cancer Therapeutic Agents with Case Studies of Food and Drug Administration-Approved Drugs.

Authors:  Nathan P Coussens; John C Braisted; Tyler Peryea; G Sitta Sittampalam; Anton Simeonov; Matthew D Hall
Journal:  Pharmacol Rev       Date:  2017-10       Impact factor: 25.468

3.  Discovery and optimization of piperazine-1-thiourea-based human phosphoglycerate dehydrogenase inhibitors.

Authors:  Jason M Rohde; Kyle R Brimacombe; Li Liu; Michael E Pacold; Adam Yasgar; Dorian M Cheff; Tobie D Lee; Ganesha Rai; Bolormaa Baljinnyam; Zhuyin Li; Anton Simeonov; Matthew D Hall; Min Shen; David M Sabatini; Matthew B Boxer
Journal:  Bioorg Med Chem       Date:  2018-02-27       Impact factor: 3.641

4.  Diaphorase Coupling Protocols for Red-Shifting Dehydrogenase Assays.

Authors:  Mindy I Davis; Min Shen; Anton Simeonov; Matthew D Hall
Journal:  Assay Drug Dev Technol       Date:  2016-04       Impact factor: 1.738

5.  Using Microscale Thermophoresis to Characterize Hits from High-Throughput Screening: A European Lead Factory Perspective.

Authors:  Julie M Rainard; George C Pandarakalam; Stuart P McElroy
Journal:  SLAS Discov       Date:  2018-03       Impact factor: 3.341

6.  Development of a High-throughput Agar Colony Formation Assay to Identify Drug Candidates against Medulloblastoma.

Authors:  Mohammed Sedeeq; Ahmed Maklad; Nuri Gueven; Iman Azimi
Journal:  Pharmaceuticals (Basel)       Date:  2020-11-05

7.  Identification of Activators of Human Fumarate Hydratase by Quantitative High-Throughput Screening.

Authors:  Hu Zhu; Olivia W Lee; Pranav Shah; Ajit Jadhav; Xin Xu; Samarjit Patnaik; Min Shen; Matthew D Hall
Journal:  SLAS Discov       Date:  2019-09-14       Impact factor: 3.341

8.  Assessing inhibitors of mutant isocitrate dehydrogenase using a suite of pre-clinical discovery assays.

Authors:  Daniel J Urban; Natalia J Martinez; Mindy I Davis; Kyle R Brimacombe; Dorian M Cheff; Tobie D Lee; Mark J Henderson; Steven A Titus; Rajan Pragani; Jason M Rohde; Li Liu; Yuhong Fang; Surendra Karavadhi; Pranav Shah; Olivia W Lee; Amy Wang; Andrew McIver; Hongchao Zheng; Xiaodong Wang; Xin Xu; Ajit Jadhav; Anton Simeonov; Min Shen; Matthew B Boxer; Matthew D Hall
Journal:  Sci Rep       Date:  2017-10-06       Impact factor: 4.379

Review 9.  Epigenetic assays for chemical biology and drug discovery.

Authors:  Sheraz Gul
Journal:  Clin Epigenetics       Date:  2017-04-21       Impact factor: 6.551

  9 in total

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