Literature DB >> 27078193

Genetic Variants in IL6R and ADAM19 are Associated with COPD Severity in a Mexican Mestizo Population.

Gloria Pérez-Rubio1,2, Irma Silva-Zolezzi3, Juan Carlos Fernández-López3, Ángel Camarena1, Mónica Velázquez-Uncal1, Fabiola Morales-Mandujano3, Rafael De Jesús Hernández-Zenteno1, Fernando Flores-Trujillo1, Candelaria Sánchez-Romero1, Alejandra Velázquez-Montero1, Carlos Espinosa de Los Monteros1, Raúl H Sansores1, Alejandra Ramírez-Venegas1, Ramcés Falfán-Valencia1.   

Abstract

Chronic obstructive pulmonary disease (COPD) is a complex and multifactorial disease with a strong genetic component. Our objective is to identify the genetic variants associated with COPD risk and its severity in Mexican Mestizo population. We evaluated 1285 single-nucleotide polymorphisms (SNPs) of candidate genes in 299 smokers with COPD (COPD-S) and 531 smokers without COPD (SWOC) using an Illumina GoldenGate genotyping microarray. In addition, 251 ancestry informative markers were included. Allele A of rs2545771 in CYP2F2P is associated with a lower risk of COPD (p = 4.02E-10, odds ratio [OR] = 0.104, confidence interval [CI] 95% 0.05-0.18). When the COPD group was stratified by severity according to the Global Initiative for Chronic Obstructive Lung Disease (GOLD; levels III + IV vs. I + II), 3 SNPs (rs4329505 and rs4845626 in interleukin 6 receptor [IL6R] and rs1422794 in a disintegrin and metalloproteinase domain 19 [ADAM19]) were associated with a lower risk of suffering the most severe stages of the disease. rs2819096 in the surfactant protein D (SFTPD) gene was associated with a higher risk of COPD GOLD III + IV (p = 7.79E-03, OR = 1.80, CI 95% 1.16-2.79). Finally, the haplotype in IL6R was associated with a lower risk of suffering from more severe COPD, whereas the haplotype in ADAM19 was associated with a higher risk (p = 7.40E-03, OR = 2.83, CI 95% 1.20-6.86) of suffering from the severe stages of the disease. Our data suggest that there are alleles and haplotypes in the IL6R, ADAM19, and SFTPD genes associated with different severity stages of COPD; in CYP2F2P, rs25455771 is associated with a lower risk of COPD.

Entities:  

Keywords:  Candidate gene; GOLD; Genetic association; SNPs

Mesh:

Substances:

Year:  2016        PMID: 27078193     DOI: 10.3109/15412555.2016.1161017

Source DB:  PubMed          Journal:  COPD        ISSN: 1541-2563            Impact factor:   2.409


  18 in total

1.  A pilot study of single nucleotide polymorphisms in the interleukin-6 receptor and their effects on pre- and post-transplant serum mediator level and outcome after allogeneic stem cell transplantation.

Authors:  T H A Tvedt; R Hovland; G Tsykunova; A B Ahmed; T Gedde-Dahl; Ø Bruserud
Journal:  Clin Exp Immunol       Date:  2018-04-01       Impact factor: 4.330

2.  Development of a Blood-based Transcriptional Risk Score for Chronic Obstructive Pulmonary Disease.

Authors:  Matthew Moll; Adel Boueiz; Auyon J Ghosh; Aabida Saferali; Sool Lee; Zhonghui Xu; Jeong H Yun; Brian D Hobbs; Craig P Hersh; Don D Sin; Ruth Tal-Singer; Edwin K Silverman; Michael H Cho; Peter J Castaldi
Journal:  Am J Respir Crit Care Med       Date:  2022-01-15       Impact factor: 21.405

3.  A systematic analysis of protein-altering exonic variants in chronic obstructive pulmonary disease.

Authors:  Matthew Moll; Victoria E Jackson; Bing Yu; Megan L Grove; Stephanie J London; Sina A Gharib; Traci M Bartz; Colleen M Sitlani; Josée Dupuis; George T O'Connor; Hanfei Xu; Patricia A Cassano; Bonnie Kaufmann Patchen; Woo Jin Kim; Jinkyeong Park; Kun Hee Kim; Buhm Han; R Graham Barr; Ani Manichaikul; Jennifer N Nguyen; Stephen S Rich; Lies Lahousse; Natalie Terzikhan; Guy Brusselle; Phuwanat Sakornsakolpat; Jiangyuan Liu; Christopher J Benway; Ian P Hall; Martin D Tobin; Louise V Wain; Edwin K Silverman; Michael H Cho; Brian D Hobbs
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2021-04-28       Impact factor: 6.011

4.  Polymorphisms in HTR2A and DRD4 Predispose to Smoking and Smoking Quantity.

Authors:  Gloria Pérez-Rubio; Alejandra Ramírez-Venegas; Valeri Noé Díaz; Leonor García Gómez; Karina Elvira Fabián; Salvador García Carmona; Luis A López-Flores; Enrique Ambrocio-Ortiz; Rocío Contreras Romero; Noé Alcantar-Ayala; Raúl H Sansores; Ramcés Falfán-Valencia
Journal:  PLoS One       Date:  2017-01-19       Impact factor: 3.240

5.  ADAM17 and EGFR regulate IL-6 receptor and amphiregulin mRNA expression and release in cigarette smoke-exposed primary bronchial epithelial cells from patients with chronic obstructive pulmonary disease (COPD).

Authors:  Marta Stolarczyk; Gimano D Amatngalim; Xiao Yu; Mieke Veltman; Pieter S Hiemstra; Bob J Scholte
Journal:  Physiol Rep       Date:  2016-08

Review 6.  The EGFR-ADAM17 Axis in Chronic Obstructive Pulmonary Disease and Cystic Fibrosis Lung Pathology.

Authors:  Marta Stolarczyk; Bob J Scholte
Journal:  Mediators Inflamm       Date:  2018-01-09       Impact factor: 4.711

Review 7.  Surfactant Protein D in Respiratory and Non-Respiratory Diseases.

Authors:  Grith L Sorensen
Journal:  Front Med (Lausanne)       Date:  2018-02-08

8.  MS4A2-rs573790 Is Associated With Aspirin-Exacerbated Respiratory Disease: Replicative Study Using a Candidate Gene Strategy.

Authors:  Gandhi F Pavón-Romero; Gloria Pérez-Rubio; Fernando Ramírez-Jiménez; Enrique Ambrocio-Ortiz; Elisé Bañuelos-Ortiz; Norma Alvarado-Franco; Karen E Xochipa-Ruiz; Elizabeth Hernández-Juárez; Beatriz A Flores-García; Ángel E Camarena; Luis M Terán; Ramcés Falfán-Valencia
Journal:  Front Genet       Date:  2018-09-11       Impact factor: 4.599

9.  Genetic Association of Pulmonary Surfactant Protein Genes, SFTPA1, SFTPA2, SFTPB, SFTPC, and SFTPD With Cystic Fibrosis.

Authors:  Zhenwu Lin; Nithyananda Thorenoor; Rongling Wu; Susan L DiAngelo; Meixia Ye; Neal J Thomas; Xiaojie Liao; Tony R Lin; Stuart Warren; Joanna Floros
Journal:  Front Immunol       Date:  2018-10-02       Impact factor: 7.561

10.  Heterozygous Genotype rs17580 AT (PiS) in SERPINA1 is Associated with COPD Secondary to Biomass-Burning and Tobacco Smoking: A Case-Control and Populational Study.

Authors:  Gloria Pérez-Rubio; Enrique Ambrocio-Ortiz; Luis A López-Flores; Ana I Juárez-Martín; Luis Octavio Jiménez-Valverde; Susana Zoreque-Cabrera; Gustavo Galicia-Negrete; María Elena Ramírez-Díaz; Filiberto Cruz-Vicente; Manuel de Jesús Castillejos-López; Citlaltepetl Salinas-Lara; Rafael de Jesús Hernández-Zenteno; Alejandra Ramírez-Venegas; Ramcés Falfán-Valencia
Journal:  Int J Chron Obstruct Pulmon Dis       Date:  2020-05-27
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.