| Literature DB >> 27076854 |
Haiming Xu1, Yu Ma2, Yan Zhang3, Zimin Pan4, Yan Lu5, Pengyuan Liu6, Bingjian Lu7.
Abstract
Ovarian carcinomas (OC) are often found in the advanced stage with wide peritoneal dissemination. Differentially-expressed genes (DEGs) between primary ovarian carcinoma (POC) and peritoneal metastatic ovarian carcinomas (PMOC) may have diagnostic and therapeutic values. In this study, we identified 246 DEGs by in-silico analysis using microarrays for 153 POCs and 57 PMOCs. Pathway analysis shows that many of these genes are associated with lipid metabolism. Microfluidic, card-based, quantitative PCR validated 19 DEGs in PMOCs versus POCs (p<0.05). Immunohistochemistry confirmed overexpression of MMP13, CTSK, FGF1 and GREM1 in PMOCs (p<0.05). ELISA detection indicated that serum CTSK levels were significantly increased in OCs versus controls (p<0.001). CTSK levels discriminated between OCs and healthy controls (ROC 0.739; range 0.685-0.793). Combining CA125 and HE4 with CTSK levels produced an improved specificity in the predictive of OCs (sensitivity 88.3%, specificity 92.0%, Youden's index 80.3%). Our study suggests that CTSK levels may be helpful in the diagnosis of primary, ovarian carcinoma.Entities:
Keywords: CTSK (cathepsin K).; metastasis; microarray; ovarian carcinoma
Year: 2016 PMID: 27076854 PMCID: PMC4829559 DOI: 10.7150/jca.14277
Source DB: PubMed Journal: J Cancer ISSN: 1837-9664 Impact factor: 4.207
Validation of DEGs in POCs versus PMOCs by microfluidic cards Q-PCR.
| Gene Symbol | ΔCt in POC (Mean±SD) | ΔCt in PMOC (Mean±SD) | |
|---|---|---|---|
| ADAM12 | 6.69±2.22 | 5.82±1.98 | 0.103 |
| AGR2 | 9.61±3.54 | 9.67±3.27 | 0.923 |
| ALPK2 | 7.38±2.30 | 6.22±4.96 | 0.209 |
| AOC3 | 8.81±2.01 | 7.77±2.68 | |
| ARX | 14.22±4.22 | 17.48±3.84 | |
| ATRNL1 | 10.44±2.39 | 10.57±2.55 | 0.839 |
| BCHE | 11.19±3.32 | 9.71±2.83 | |
| C1QTNF3 | 8.19±1.70 | 7.37±2.39 | 0.082 |
| C1QTNF6 | 8.34±1.72 | 7.52±1.98 | 0.058 |
| C4BPA | 11.53±3.37 | 12.29±3.91 | 0.289 |
| CADPS | 15.30±4.02 | 14.75±5.10 | 0.627 |
| CAMK2N1 | 6.42±2.00 | 8.37±1.68 | 0.874 |
| CCDC68 | 10.17±1.71 | 10.08±2.08 | 0.809 |
| CCDC85A | 10.40±1.60 | 10.58±2.47 | 0.748 |
| CCL19 | 10.54±2.62 | 9.05±3.97 | 0.094 |
| CD36 | 8.45±1.80 | 6.87±2.53 | |
| CFD | 7.88±1.71 | 6.87±2,47 | |
| CIDEA | 16.25±3.62 | 13.83±5.46 | |
| CIDEC | 12.37±2.72 | 11.43±3.96 | 0.252 |
| CLIC6 | 7.47±3.04 | 7.92±2.11 | 0.454 |
| COLEC11 | 10.17±3.06 | 10.70±2.38 | 0.442 |
| COMP | 8.46±3.08 | 7.49±2.95 | 0.136 |
| CRISPLD2 | 6.58±2.14 | 5.50±2.06 | 0.051 |
| CRYM | 11.98±2.21 | 12.21±2.79 | 0.795 |
| CTSK | 5.28±2.01 | 4.40±1.91 | |
| CXCL12 | 4.80±1.64 | .46±3.49 | 0.081 |
| DARC | 8.25±2.25 | 5.15±4.57 | 0.198 |
| DLK1 | 11.72±5.82 | 12.72±7.40 | 0.829 |
| DPT | 10.31±3.52 | 8.79±3.1 | 0.053 |
| ELN | 9.76±1.94 | 9.39±3.15 | 0.538 |
| ENPP6 | 16.16±4.2 | 17.28±3.87 | 0.277 |
| EPYC | 9.99±3.14 | 7.97±3.18 | |
| F2RL1 | 8.05±1.30 | 7.97±1.88 | 0.817 |
| FAP | 6.93±2.08 | 5.83±1.99 | 0.065 |
| FBLN1 | 4.58±1.93 | 4.18±2.25 | 0.373 |
| FBLN2 | 7.99±2.13 | 7.19±2.25 | 0.108 |
| FBN1 | 5.72±1.78 | 5.17±1.69 | 0.211 |
| FGF1 | 9.67±1.47 | 8.46±2.70 | 0.058 |
| FGFR4 | 8.60±1.78 | 8.96±1.96 | 0.463 |
| FOXA2 | 9.55±2.41 | 9.66±3.17 | 0.849 |
| FOXL2 | 5.73±2.59 | 4.67±4.99 | 0.266 |
| GABRP | 10.56±3.22 | 9.91±3.29 | 0.242 |
| GATA4 | 9.83±3.73 | 11.20±3.58 | 0.159 |
| GDF15 | 7.09±1.96 | 7.32±2.11 | 0.602 |
| GHR | 9.16±1.57 | 8.65±1.87 | 0.216 |
| GREM1 | 8.57±3.2 | 6.78±2.05 | |
| GSTA1 | 10.54±2.65 | 10.42±3.15 | 0.871 |
| GZMK | 9.85±2.21 | 8.71±2.45 | |
| HNF1B | 11.23±4.72 | 10.97±4.22 | 0.756 |
| HS6ST2 | 18.34±2.23 | 18.38±3.58 | 0.96 |
| INHBA | 7.29±1.89 | 6.00±1.92 | |
| ITGBL1 | 8.42±2.40 | 7.66±2.69 | 0.21 |
| KIAA1324 | 9.61±2.35 | 9.31±3.00 | 0.578 |
| LRRC15 | 5.69±1.72 | 4.10±4.22 | 0.055 |
| LUM | 3.91±2.34 | 3.08±3.63 | 0.288 |
| MEOX2 | 10.02±2.69 | 8.36±3.13 | |
| MFAP4 | 6.87±2.31 | 6.04±2.24 | 0.15 |
| MGP | 4.97±3.16 | 4.31±2.48 | 0.409 |
| MMP11 | 4.67±2.33 | 3.20±2.32 | |
| MMP13 | 9.40±3.71 | 7.68±2.45 | |
| MNX1 | 15.04±3.34 | 14.71±3.95 | 0.701 |
| MSMB | 15.84±4.23 | 14.73±7.66 | 0.351 |
| MYOCD | 10.23±3.41 | 11.79±2.90 | 0.072 |
| NDP | 9.92±2.89 | 9.68±3.66 | 0.669 |
| NR1H4 | 16.32±3.59 | 17.07±3.48 | 0.437 |
| OLFM4 | 14.63±4.93 | 13.98±4.88 | 0.46 |
| OVGP1 | 11.07±1.9 | 10.69±2.28 | 0.329 |
| PCSK6 | 8.75±2.47 | 9.22±2.27 | 0.385 |
| PDLIM3 | 5.16±1.82 | 4.64±1.67 | 0.142 |
| PEG3 | 6.50±2.50 | 5.50±4.35 | 0.254 |
| PIGR | 8.93±3.52 | 9.13±3.55 | 0.722 |
| PLAC9 | 10.37±2.21 | 10.19±2.59 | 0.789 |
| PLS1 | 7.53±1.35 | 7.10±2.15 | 0.339 |
| POSTN | 3.85±2.87 | 2.34±2.29 | |
| PPP1R1A | 8.71±1.88 | 7.83±2.47 | |
| PRG4 | 12.96±3.48 | 10.31±4.64 | |
| PROM1 | 8.67±3.46 | 7.85±3.29 | 0.163 |
| PRRX1 | 6.70±2.05 | 5.94±1.60 | 0.095 |
| PTGER3 | 7.55±2.14 | 6.50±2.42 | 0.067 |
| RDH10 | 6.60±1.53 | 6.32±2.19 | 0.462 |
| RSPO3 | 7.44±2.28 | 5.68±2.06 | |
| SORBS1 | 6.93±1.30 | 6.56±1.70 | 0.258 |
| SOX11 | 7.74±2.56 | 6.66±5.02 | 0.25 |
| STAR | 10.28±4.44 | 13.62±3.87 | |
| SVEP1 | 8.66±2.06 | 7.60±2.30 | 0.056 |
| TCF21 | 8.47±2.44 | 8.37±1.91 | 0.867 |
| TCN1 | 11.88±3.52 | 12.05±3.09 | 0.808 |
| TFF3 | 9.76±3.64 | 9.94±2.65 | 0.758 |
| THBS2 | 5.07±2.25 | 4.15±1.94 | 0.11 |
| THRSP | 10.53±2.84 | 9.36±3.55 | 0.085 |
| TIMP3 | 4.28±1.69 | 3.79±1.72 | 0.224 |
| TIMP4 | 11.39±1.92 | 10.31±3.32 | 0.072 |
| TMC5 | 10.14±2.45 | 10.23±3.19 | 0.89 |
| TMEM45B | 8.16±2.03 | 8.03±2.05 | 0.815 |
| TSPAN8 | 10.57±3.68 | 11.84±4.03 | 0.166 |
Serum CTSK, CA125, MMP13, FGF1 and HE4 in ovarian tumors and normal controls*.
| FGF1 (pg/mL) | CTSK (ng/mL) | MMP13 (pg/mL) | HE4 (pmol/L) | CA125 (U/mL) | |
|---|---|---|---|---|---|
| Normal control | 186.7±470.8 | 0.5±0.9 | 16.5±19.8 | 45.3±17.1 | 14.9±7.8 |
| Borderline tumor | 121.0±218.9 | 0.9±0.9 | 13.2±12.1 | 70.4±118.7 | 837.9±1036.0 |
| OC | 113.8±346.4 | 1.4±1.4 | 11.8±13.6 | 213.5±323.1 | 1095.8±2729.0 |
| >0.05 | >0.05 |
*Mean±SD was given.
The parameters of CA125, HE4 and CTSK for discriminating OCs from healthy controls.
| Variables | Area (95% CI) | Cutoff value | Sensitivity (%) | Specificity (%) | YI (%) |
|---|---|---|---|---|---|
| CA125 | 0.929(0.898-0.959) | 26.15 U/mL | 82.5 | 94.8 | 77.3 |
| HE4 | 0.822(0.774-0.869) | 53.25 pmol/L | 73.3 | 82.4 | 55.7 |
| CTSK | 0.739(0.685-0.793) | 0.344 ng/mL | 75.3 | 73.2 | 47.5 |
Abbreviations: CI=Confidence Interval; YI=Youden's index.