Literature DB >> 27073735

Fourier transform infrared microspectroscopy for the analysis of the biochemical composition of C. elegans worms.

Ming Sheng1, András Gorzsás2, Simon Tuck1.   

Abstract

Changes in intermediary metabolism have profound effects on many aspects of C. elegans biology including growth, development and behavior. However, many traditional biochemical techniques for analyzing chemical composition require relatively large amounts of starting material precluding the analysis of mutants that cannot be grown in large amounts as homozygotes. Here we describe a technique for detecting changes in the chemical compositions of C. elegans worms by Fourier transform infrared microspectroscopy. We demonstrate that the technique can be used to detect changes in the relative levels of carbohydrates, proteins and lipids in one and the same worm. We suggest that Fourier transform infrared microspectroscopy represents a useful addition to the arsenal of techniques for metabolic studies of C. elegans worms.

Entities:  

Keywords:  C. elegans; Fourier transform infrared; carbohydrate; composition; lipid; microspectroscopy; protein

Year:  2016        PMID: 27073735      PMCID: PMC4827452          DOI: 10.1080/21624054.2015.1132978

Source DB:  PubMed          Journal:  Worm        ISSN: 2162-4046


  34 in total

Review 1.  Spatial resolution in infrared microspectroscopic imaging of tissues.

Authors:  Peter Lasch; Dieter Naumann
Journal:  Biochim Biophys Acta       Date:  2006-06-09

2.  Critical periods in the development of the Caenorhabditis elegans dauer larva.

Authors:  M M Swanson; D L Riddle
Journal:  Dev Biol       Date:  1981-05       Impact factor: 3.582

3.  C. elegans major fats are stored in vesicles distinct from lysosome-related organelles.

Authors:  Eyleen J O'Rourke; Alexander A Soukas; Christopher E Carr; Gary Ruvkun
Journal:  Cell Metab       Date:  2009-11       Impact factor: 27.287

4.  The genetics of Caenorhabditis elegans.

Authors:  S Brenner
Journal:  Genetics       Date:  1974-05       Impact factor: 4.562

5.  Genome-wide RNAi analysis of Caenorhabditis elegans fat regulatory genes.

Authors:  Kaveh Ashrafi; Francesca Y Chang; Jennifer L Watts; Andrew G Fraser; Ravi S Kamath; Julie Ahringer; Gary Ruvkun
Journal:  Nature       Date:  2003-01-16       Impact factor: 49.962

6.  Mercury cadmium telluride focal-plane array detection for mid-infrared Fourier-transform spectroscopic imaging.

Authors:  L H Kidder; I W Levin; E N Lewis; V D Kleiman; E J Heilweil
Journal:  Opt Lett       Date:  1997-05-15       Impact factor: 3.776

7.  A tissue-specific approach to the analysis of metabolic changes in Caenorhabditis elegans.

Authors:  Jürgen Hench; Ivana Bratić Hench; Claire Pujol; Sabine Ipsen; Susanne Brodesser; Arnaud Mourier; Markus Tolnay; Stephan Frank; Aleksandra Trifunović
Journal:  PLoS One       Date:  2011-12-05       Impact factor: 3.240

8.  OrthoList: a compendium of C. elegans genes with human orthologs.

Authors:  Daniel D Shaye; Iva Greenwald
Journal:  PLoS One       Date:  2011-05-25       Impact factor: 3.240

9.  Aberrant fat metabolism in Caenorhabditis elegans mutants with defects in the defecation motor program.

Authors:  Ming Sheng; Ava Hosseinzadeh; Somsundar Veppil Muralidharan; Rahul Gaur; Eva Selstam; Simon Tuck
Journal:  PLoS One       Date:  2015-04-07       Impact factor: 3.240

Review 10.  Comparison of the complete protein sets of worm and yeast: orthology and divergence.

Authors:  S A Chervitz; L Aravind; G Sherlock; C A Ball; E V Koonin; S S Dwight; M A Harris; K Dolinski; S Mohr; T Smith; S Weng; J M Cherry; D Botstein
Journal:  Science       Date:  1998-12-11       Impact factor: 47.728

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  1 in total

1.  Global Proteomic Response of Caenorhabditis elegans Against PemKSa Toxin.

Authors:  Dilawar Ahmad Mir; Krishnaswamy Balamurugan
Journal:  Front Cell Infect Microbiol       Date:  2019-05-31       Impact factor: 5.293

  1 in total

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