Literature DB >> 27072883

Protein-specific localization of a rhodamine-based calcium-sensor in living cells.

Marcel Best1, Isabel Porth, Sebastian Hauke, Felix Braun, Dirk-Peter Herten, Richard Wombacher.   

Abstract

A small synthetic calcium sensor that can be site-specifically coupled to proteins in living cells by utilizing the bio-orthogonal HaloTag labeling strategy is presented. We synthesized an iodo-derivatized BAPTA chelator with a tetramethyl rhodamine fluorophore that allows further modification by Sonogashira cross-coupling. The presented calcium sensitive dye shows a 200-fold increase in fluorescence upon calcium binding. The derivatization with an aliphatic linker bearing a terminal haloalkane-function by Sonogashira cross-coupling allows the localization of the calcium sensor to Halo fusion proteins which we successfully demonstrate in in vitro and in vivo experiments. The herein reported highly sensitive tetramethyl rhodamine based calcium indicator, which can be selectively localized to proteins, is a powerful tool to determine changes in calcium levels inside living cells with spatiotemporal resolution.

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Year:  2016        PMID: 27072883     DOI: 10.1039/c6ob00365f

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  5 in total

1.  Light-Up "Channel Dyes" for Haloalkane-Based Protein Labeling in Vitro and in Bacterial Cells.

Authors:  Spencer A Clark; Vijay Singh; Daniel Vega Mendoza; William Margolin; Eric T Kool
Journal:  Bioconjug Chem       Date:  2016-12-01       Impact factor: 4.774

2.  Bioorthogonal, Fluorogenic Targeting of Voltage-Sensitive Fluorophores for Visualizing Membrane Potential Dynamics in Cellular Organelles.

Authors:  Pavel E Z Klier; Anneliese M M Gest; Julia G Martin; Ryan Roo; Marisol X Navarro; Lauren Lesiak; Parker E Deal; Neville Dadina; Jonathan Tyson; Alanna Schepartz; Evan W Miller
Journal:  J Am Chem Soc       Date:  2022-07-01       Impact factor: 16.383

3.  A Bioorthogonal Click Chemistry Toolbox for Targeted Synthesis of Branched and Well-Defined Protein-Protein Conjugates.

Authors:  Mathis Baalmann; Laura Neises; Sebastian Bitsch; Hendrik Schneider; Lukas Deweid; Philipp Werther; Nadja Ilkenhans; Martin Wolfring; Michael J Ziegler; Jonas Wilhelm; Harald Kolmar; Richard Wombacher
Journal:  Angew Chem Int Ed Engl       Date:  2020-05-26       Impact factor: 15.336

4.  Fluorescent and Bioluminescent Calcium Indicators with Tuneable Colors and Affinities.

Authors:  Nicole Mertes; Marvin Busch; Magnus-Carsten Huppertz; Christina Nicole Hacker; Jonas Wilhelm; Clara-Marie Gürth; Stefanie Kühn; Julien Hiblot; Birgit Koch; Kai Johnsson
Journal:  J Am Chem Soc       Date:  2022-04-05       Impact factor: 16.383

5.  Visualization of long-term Mg2+ dynamics in apoptotic cells using a novel targetable fluorescent probe.

Authors:  Yusuke Matsui; Yosuke Funato; Hiromi Imamura; Hiroaki Miki; Shin Mizukami; Kazuya Kikuchi
Journal:  Chem Sci       Date:  2017-10-20       Impact factor: 9.825

  5 in total

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