Literature DB >> 27070321

Single-Molecule Studies in Live Cells.

Ji Yu1.   

Abstract

Live-cell single-molecule experiments are now widely used to study complex biological processes such as signal transduction, self-assembly, active trafficking, and gene regulation. These experiments' increased popularity results in part from rapid methodological developments that have significantly lowered the technical barriers to performing them. Another important advance is the development of novel statistical algorithms, which, by modeling the stochastic behaviors of single molecules, can be used to extract systemic parameters describing the in vivo biochemistry or super-resolution localization of biological molecules within their physiological environment. This review discusses recent advances in experimental and computational strategies for live-cell single-molecule studies, as well as a selected subset of biological studies that have utilized these new technologies.

Keywords:  live-cell imaging; single-particle tracking; super-resolution imaging

Mesh:

Substances:

Year:  2016        PMID: 27070321     DOI: 10.1146/annurev-physchem-040215-112451

Source DB:  PubMed          Journal:  Annu Rev Phys Chem        ISSN: 0066-426X            Impact factor:   12.703


  17 in total

1.  SMALL-LABS: Measuring Single-Molecule Intensity and Position in Obscuring Backgrounds.

Authors:  Benjamin P Isaacoff; Yilai Li; Stephen A Lee; Julie S Biteen
Journal:  Biophys J       Date:  2019-02-16       Impact factor: 4.033

Review 2.  Facilitated diffusion of Argonaute-mediated target search.

Authors:  Tao Ju Cui; Chirlmin Joo
Journal:  RNA Biol       Date:  2019-05-20       Impact factor: 4.652

3.  In vitro labeling strategies for in cellulo fluorescence microscopy of single ribonucleoprotein machines.

Authors:  Thomas C Custer; Nils G Walter
Journal:  Protein Sci       Date:  2017-02-12       Impact factor: 6.725

4.  High-numerical-aperture cryogenic light microscopy for increased precision of superresolution reconstructions.

Authors:  Marc Nahmani; Conor Lanahan; David DeRosier; Gina G Turrigiano
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-27       Impact factor: 11.205

Review 5.  Dynamic chromatin technologies: from individual molecules to epigenomic regulation in cells.

Authors:  Olivier Cuvier; Beat Fierz
Journal:  Nat Rev Genet       Date:  2017-05-22       Impact factor: 53.242

6.  Multistep Track Segmentation and Motion Classification for Transient Mobility Analysis.

Authors:  Anthony R Vega; Spencer A Freeman; Sergio Grinstein; Khuloud Jaqaman
Journal:  Biophys J       Date:  2018-03-13       Impact factor: 4.033

7.  Simultaneous Multicolor Single-Molecule Tracking with Single-Laser Excitation via Spectral Imaging.

Authors:  Tao Huang; Carey Phelps; Jing Wang; Li-Jung Lin; Amy Bittel; Zubenelgenubi Scott; Steven Jacques; Summer L Gibbs; Joe W Gray; Xiaolin Nan
Journal:  Biophys J       Date:  2018-01-23       Impact factor: 4.033

8.  Role of Actin Cytoskeleton in Dynamics and Function of the Serotonin1A Receptor.

Authors:  Sandeep Shrivastava; Parijat Sarkar; Pascal Preira; Laurence Salomé; Amitabha Chattopadhyay
Journal:  Biophys J       Date:  2019-09-05       Impact factor: 4.033

9.  Single molecule analysis of lamin dynamics.

Authors:  Leonid A Serebryannyy; David A Ball; Tatiana S Karpova; Tom Misteli
Journal:  Methods       Date:  2018-08-24       Impact factor: 3.608

Review 10.  The needle and the haystack: single molecule tracking to probe the transcription factor search in eukaryotes.

Authors:  Matteo Mazzocca; Tom Fillot; Alessia Loffreda; Daniela Gnani; Davide Mazza
Journal:  Biochem Soc Trans       Date:  2021-06-30       Impact factor: 5.407

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