| Literature DB >> 27070310 |
Xiu-Jie Xi1, Yun-Guo Zhu1, Ying-Peng Tong2, Xiao-Ling Yang1, Nan-Nan Tang1, Shu-Min Ma1, Shan Li1, Zhou Cheng1.
Abstract
Job's tears (Coix lachryma-jobi L.) is an important crop used as food and herbal medicine in Asian countries. A drug made of Job's tears seed oil has been clinically applied to treat multiple cancers. In this study, the genetic diversity of Job's tears accessions and the fatty acid composition, triglyceride composition, and anti-proliferative effect of Job's tears seed oil were analyzed using morphological characteristics and ISSR markers, GC-MS, HPLC-ELSD, and the MTT method. ISSR analysis demonstrated low genetic diversity of Job's tears at the species level (h = 0.21, I = 0.33) and the accession level (h = 0.07, I = 0.10), and strong genetic differentiation (GST = 0.6702) among all accessions. It also clustered the 11 accessions into three cultivated clades corresponding with geographical locations and two evidently divergent wild clades. The grouping patterns based on morphological characteristics and chemical profiles were in accordance with those clustered by ISSR analysis. Significant differences in morphological characteristics, fatty acid composition, triglyceride composition, and inhibition rates of seed oil were detected among different accessions, which showed a highly significant positive correlation with genetic variation. These results suggest that the seed morphological characteristics, fatty acid composition, and triglyceride composition may be mainly attributed to genetic factors. The proportion of palmitic acid and linoleic acid to oleic acid displayed a highly significant positive correlation with the inhibition rates of Job's tears seed oil for T24 cells, and thus can be an important indicator for quality control for Job's tears.Entities:
Mesh:
Substances:
Year: 2016 PMID: 27070310 PMCID: PMC4829220 DOI: 10.1371/journal.pone.0153269
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Geographic localities of Job’s tears accessions used in this study.
Accession codes were defined in Table 1.
Codes and geographic localities of Job’s tears accessions used in this study.
| Accession Codes | Geographic localities | Longitude (N) | Latitude (E) |
|---|---|---|---|
| SCCD | Chengdu, Sichuan Province | 104°03′44.18″ | 30°34′21.43″ |
| ZJLD | Liandu, Zhejiang Province | 119°54′30.32″ | 28°26′57.77″ |
| LNYX | Yixian, Liaoning Province | 121°14′01.00″ | 41°31′51.74″ |
| SDHZ | Heze, Shandong Province | 115°28′30.98″ | 35°14′02.71″ |
| AHBZ | Bozhou, Anhui Province | 115°47′38.78″ | 33°50′22.68″ |
| ZJJY | Jinyun, Zhejiang Province | 120°05′12.84″ | 28°39′43.80″ |
| FJPC | Pucheng, Fujian Province | 118°32′11.88″ | 27°55′13.87″ |
| ZJTS | Taishun, Zhejiang Province | 119°42′46.15″ | 27°33′34.75″ |
| GZXR | Xingren, Guizhou Province | 105°10′22.80″ | 25°26′05.17″ |
| YNSZ | Shizong, Yunnan Province | 103°59′16.29″ | 24°49′53.32″ |
| GXXL | Xilin, Guangxi Province | 105°05′26.73″ | 24°29′32.43″ |
Abbreviations listed here are those used in all subsequent figures.
*Asterisks indicate wild accessions.
Fig 2Seed morphological characteristics of Job’s tears accessions.
Seed color: brown (SCCD, ZJLD, LNYX, SDHZ, AHBZ and YNSZ), yellow-white (ZJJY, FJPC, ZJTS, GZXR and GXXL); Seed hardness: high (SCCD and ZJLD), moderate (LNYX, SDHZ, AHBZ and YNSZ), low (ZJJY, FJPC, ZJTS, GZXR and GXXL); Surface stripe of seed: absent (SCCD and ZJLD), present (LNYX, SDHZ, AHBZ, ZJJY, FJPC, ZJTS, GZXR, YNSZ and GXXL); Color of seed kernel: red-brown (SCCD, ZJLD, LNYX, SDHZ and AHBZ), yellow (ZJJY, FJPC, ZJTS, GZXR, YNSZ and GXXL); Seed size: big (SCCD and ZJLD), moderate (ZJJY, FJPC, ZJTS, GZXR, YNSZ and GXXL), small (LNYX, SDHZ and AHBZ); Seed shape: round (SCCD and ZJLD), moderate (ZJJY, FJPC, ZJTS, GZXR, YNSZ and GXXL), narrow (LNYX, SDHZ and AHBZ).
Fig 3PCA scatter plot of Job’s tears accessions constructed by seed morphological characteristics.
Accession codes were defined in Table 1.
Mean values of quantitative seed morphological characteristics among the divided Job’s tears groups.
| Morphological Characteristics | Wild Group | Northern Group | Southern and central Group |
|---|---|---|---|
| Seed weight (g) | 0.230±0.074 a | 0.086±0.007 b | 0.106±0.012 b |
| Seed thickness (cm) | 0.640±0.066 a | 0.476±0.021 c | 0.537±0.022 b |
| Seed length (cm) | 0.966±0.080 a | 0.828±0.038 b | 0.877±0.031 b |
| Seed width (cm) | 0.744±0.092 a | 0.549±0.027 c | 0.630±0.029 b |
| Length-width ratio of seed | 1.303±0.053 b | 1.515±0.022 a | 1.398±0.093 ab |
| Weight of seed kernel (g) | 0.074±0.024 ab | 0.056±0.006 b | 0.078±0.006 a |
| Weight of hull and testa (g) | 0.156±0.050 a | 0.030±0.002 b | 0.028±0.008 b |
| Thickness of seed kernel (cm) | 0.369±0.046 ab | 0.349±0.015 b | 0.401±0.013 a |
| Length of seed kernel (cm) | 0.490±0.048 a | 0.506±0.015 a | 0.520±0.017 a |
| Width of seed kernel (cm) | 0.550±0.065 a | 0.447±0.016 b | 0.518±0.017 a |
| Length-width ratio of seed kernel | 0.894±0.019 c | 1.135±0.033 a | 1.007±0.047 b |
Different lowercases indicated significant difference at level of 0.05 by Least-Significant Difference Test (LSD).
Primers used for genetic analysis of Job’s tears accessions.
| Primer | Sequence | TA (°C) | NPF/NF | PPF (%) |
|---|---|---|---|---|
| UBC814 | (CT)8A | 54 | 8/8 | 100 |
| UBC824 | (TC)8G | 54 | 10/10 | 100 |
| UBC825 | (AC)8T | 54 | 8/11 | 72.7 |
| UBC826 | (AC)8C | 54 | 7/10 | 70.0 |
| UBC827 | (AC)8G | 52 | 7/10 | 70.0 |
| UBC842 | (GA)8YG | 52 | 9/10 | 90.0 |
| UBC857 | (AC)8YG | 55 | 7/9 | 77.8 |
| UBC874 | (CCCT)4 | 50 | 12/13 | 92.3 |
| UBC886 | VDV(CT)7 | 54 | 8/10 | 80.0 |
| UBC891 | HVH(TG)7 | 54 | 11/12 | 91.7 |
Y = (C, T); V = (A, C, G); D = (A, G, T); H = (A, C, T); TA: Annealing temperature; NPF: number of polymorphic fragments; NF: number of amplified fragments; PPF: percentage of polymorphic fragments.
Genetic diversity parameters of Job’s tears accessions.
| Accession | PPF (%) | ||
|---|---|---|---|
| Wild accession | |||
| SCCD | 0.0415 | 0.0606 | 10.68 |
| ZJLD | 0.0254 | 0.0377 | 6.80 |
| Mean | 0.0335±0.0114 | 0.0492±0.0162 | 8.74±2.74 |
| Cultivated accession | |||
| LNYX | 0.0927 | 0.1398 | 28.16 |
| SDHZ | 0.1112 | 0.1638 | 30.10 |
| AHBZ | 0.0736 | 0.1104 | 21.36 |
| ZJJY | 0.0330 | 0.0502 | 11.65 |
| FJPC | 0.0924 | 0.1386 | 27.18 |
| ZJTS | 0.1325 | 0.1943 | 34.95 |
| GZXR | 0.0540 | 0.0822 | 16.50 |
| YNSZ | 0.0392 | 0.0603 | 14.56 |
| GXXL | 0.0489 | 0.0755 | 15.53 |
| Mean | 0.0753±0.0343 | 0.1128±0.0496 | 22.22±8.16 |
| All accession | |||
| Mean | 0.0677±0.0352 | 0.1012±0.0515 | 20.36±9.43 |
h: Neiʼs expected heterozygosity
I: Shannon's Information index
PPF: percentage of polymorphic fragments.
Fig 4UPGMA dendrogram illustrating the genetic relationships among Job’s tears accessions constructed by ISSR data.
Genetic diversity parameters of all Job’s tears accessions and subdivided clades.
| Genetic diversity parameters | All accessions | Clade I | Clade II | Clade III | Clades IV and V |
|---|---|---|---|---|---|
| Total gene diversity: Ht | 0.2052 | 0.1512 | 0.1485 | 0.1333 | 0.1309 |
| Gene diversity within accessions: HS | 0.0677 | 0.0860 | 0.0925 | 0.0474 | 0.0335 |
| Coefficient of gene differentiation: GST | 0.6702 | 0.4313 | 0.3770 | 0.6447 | 0.7442 |
| Gene flow: Nm | 0.2460 | 0.6591 | 0.8262 | 0.2756 | 0.1718 |
| Neiʼs expected heterozygosity: | 0.2051 | 0.1512 | 0.1480 | 0.1333 | 0.1309 |
| Shannon's Information index: | 0.3261 | 0.2318 | 0.2298 | 0.2029 | 0.1846 |
| Number of polymorphic fragments: PF | 87 | 52 | 55 | 44 | 29 |
| Percentage of polymorphic fragments: PPF (%) | 84.47 | 50.49 | 53.40 | 42.72 | 28.16 |
Fatty acid composition of seed oil from different Job’s tears accessions and divided groups.
| Accession | Palmitic acid (%) | Linoleic acid (%) | Oleic acid (%) | Stearic acid (%) | Palmitic acid + Linoleic acid/Oleic acid |
|---|---|---|---|---|---|
| Wild Group | |||||
| SCCD | 15.16 | 31.64 | 48.65 | 2.31 | 0.96 |
| ZJLD | 13.62 | 28.82 | 53.46 | 3.03 | 0.79 |
| Mean | |||||
| Northern Group | |||||
| LNYX | 16.66 | 37.20 | 42.26 | 2.49 | 1.27 |
| SDHZ | 16.96 | 34.76 | 44.04 | 2.43 | 1.17 |
| AHBZ | 16.49 | 34.48 | 45.97 | 2.02 | 1.11 |
| Mean | |||||
| Central Group | |||||
| ZJJY | 17.77 | 39.52 | 39.15 | 2.47 | 1.46 |
| FJPC | 18.12 | 35.33 | 38.75 | 2.81 | 1.38 |
| ZJTS | 18.15 | 40.50 | 37.07 | 2.50 | 1.58 |
| Mean | |||||
| Southern Group | |||||
| GZXR | 18.60 | 36.18 | 40.17 | 3.61 | 1.36 |
| YNSZ | 18.14 | 36.44 | 41.49 | 2.98 | 1.32 |
| GXXL | 17.35 | 34.85 | 43.73 | 3.11 | 1.19 |
| Mean |
Different lowercases indicated significant difference at level of 0.05 by Least-Significant Difference Test (LSD). Mean values and significant differences of fatty acid composition of divided groups were given in boldface. For divided groups see Fig 3.
Fig 5PCA scatter plot of Job’s tears accessions constructed by fatty acid composition of seed oil.
Triglyceride composition of seed oil from different Job’s tears accessions and divided groups.
| Accession | 1 (%) | 2 (%) | 3 (%) | 4 (%) | 5 (%) | 6 (%) | 7 (%) | 8 (%) | 9 (%) |
|---|---|---|---|---|---|---|---|---|---|
| Wild Group | |||||||||
| SCCD | 1.61±0.02 f | 17.69±0.10 h | 3.19±0.01 g | 25.97±0.10 b | 9.86±0.07 f | 1.00±0.09 f | 30.79±0.08 a | 9.16±0.05 b | 0.74±0.11 d |
| ZJLD | 2.18±0.02 e | 18.51±0.26 g | 2.66±0.07 h | 29.29±0.09 a | 8.04±0.09 g | 0.75±0.23 g | 30.50±0.25 a | 7.29±0.07 de | 0.78±0.20 cd |
| Mean | |||||||||
| Northern Group | |||||||||
| LNYX | 4.57±0.05 b | 21.21±0.10 f | 6.04±0.14 e | 23.55±0.14 c | 12.95±0.06 d | 1.57±0.04 de | 19.30±0.08 b | 9.49±0.26 b | 1.30±0.09 ab |
| SDHZ | 5.02±0.10 a | 21.95±0.27 e | 6.50±0.13 cd | 22.28±0.06 f | 13.54±0.08 c | 1.71±0.11 cd | 18.36±0.09 c | 9.43±0.05 b | 1.20±0.13 a-d |
| AHBZ | 4.60±0.08 b | 21.77±0.14 ef | 4.54±0.03 f | 23.45±0.13 c | 12.14±0.22 e | 1.41±0.04 e | 19.66±0.47 b | 10.96±0.35 a | 1.47±0.23 a |
| Mean | |||||||||
| Central Group | |||||||||
| ZJJY | 4.61±0.08 b | 27.13±0.53 a | 6.70±0.33 bc | 22.90±0.49 de | 14.48±0.48 b | 2.16±0.08 a | 14.29±0.10 e-g | 6.80±0.33 e | 0.93±0.26 b-d |
| FJPC | 4.27±0.08 c | 25.74±0.38 cd | 6.48±0.05 cd | 23.43±0.30 cd | 13.47±0.23 cd | 1.68±0.04 cd | 16.12±0.25 d | 7.86±0.31 cd | 0.95±0.35 a-d |
| ZJTS | 4.92±0.03 a | 26.70±0.28 ab | 7.04±0.21 a | 22.73±0.18 ef | 14.12±0.08 b | 2.00±0.08 ab | 14.83±0.09 e | 6.75±0.04 e | 0.92±0.53 b-d |
| Mean | |||||||||
| Southern Group | |||||||||
| GZXR | 4.01±0.12 d | 26.04±0.54 bc | 6.69±0.13 bc | 23.83±0.08 c | 15.40±0.19 a | 1.74±0.20 cd | 14.09±0.75 fg | 6.89±0.60 e | 1.31±0.44 ab |
| YNSZ | 4.27±0.06 c | 25.37±0.19 cd | 6.28±0.23 de | 23.67±0.51 c | 15.34±0.43 a | 2.06±0.26 ab | 14.40±0.73 ef | 7.41±0.20 de | 1.21±0.14 a-d |
| GXXL | 3.95±0.17 d | 25.31±0.90 d | 6.83±0.31 ab | 23.52±0.64 c | 15.40±0.54 a | 1.92±0.05 bc | 13.56±0.74 g | 8.29±1.39 c | 1.23±0.32 a-c |
| Mean |
Different lowercases indicated significant difference at level of 0.05 by Least-Significant Difference Test (LSD). Mean values and significant differences of triglyceride composition of divided groups were given in boldface. For divided groups see Fig 4. 1: trilinolein; 2: 1,2-linolein-3-olein; 3: 1,2-linolein-3-palmitin; 4: 1,2-olein-3-linolein; 5: 1-palmitin-2-olein-3-linolein; 6: 1,3-palmitin-2-linolein; 7: triolein; 8: 1,2-olein-3-palmitin; 9: 1-palmitin-2-linolein-3-stearin.
Fig 6PCA scatter plot of Job’s tears accessions constructed by triglyceride composition of seed oil.
Fig 7Inhibition rates of Job’s tears seed oil for T24 cells.
(A: oil concentration = 0.33%; B: oil concentration = 0.5%; Em: emulsifier group; *: significant difference from control group)
Inhibition rates of Job’s tears seed oil for T24 cells (Mean ± SD, %).
| Accession | 0.33% | 0.5% |
|---|---|---|
| Wild Group | ||
| SCCD | -1.80±2.37 fg | 5.84±6.84 f |
| ZJLD | 2.38±4.92 ef | 12.69±3.90 ef |
| Mean | ||
| Northern Group | ||
| LNYX | 10.96±3.89 e | 38.50±14.42 d |
| SDHZ | 73.18±13.59 b | 100.66±4.71 ab |
| AHBZ | 45.75±2.98 d | 74.06±10.56 c |
| Mean | ||
| Central Group | ||
| ZJJY | 61.43±2.94 bc | 99.32±6.62 ab |
| FJPC | 50.85±5.02 cd | 99.14±7.50 ab |
| ZJTS | 101.59±0.44 a | 102.42±0.24 a |
| Mean | ||
| Southern Group | ||
| GZXR | 50.96±15.61 cd | 87.69±14.31 bc |
| YNSZ | 71.85±14.63 b | 100.48±4.39 ab |
| GXXL | 7.69±3.23 ef | 22.08±6.62 e |
| Mean | ||
| Emulsifier | -11.43±6.44 g | 2.46±12.63 f |
| MMC(100μg/mL) | 90.85±1.08 a | 89.84±1.63 ab |
Different lowercases indicated significant difference at level of 0.05 by Least-Significant Difference Test (LSD)
*: significant difference from control group.
Mean values and significant differences of inhibition rates of divided groups were given in boldface. For divided groups see Figs 3–5.
Correlation coefficients between inhibition rates and fatty acid content.
| palmitic acid | linoleic acid | oleic acid | stearic acid | |
|---|---|---|---|---|
| Inhibition rate 1 | 0.777 | 0.693 | -0.765 | -0.014 |
| Inhibition rate 2 | 0.691 | 0.706 | -0.709 | -0.084 |
*: Significant difference (P < 0.05);
**: Significant difference (P < 0.01).
Inhibition rate 1: Inhibition rate at a concentration of 0.5%; Inhibition rate 2: Inhibition rate at a concentration of 0.33%.
Correlation coefficients between inhibition rates and triglyceride content.
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | |
|---|---|---|---|---|---|---|---|---|---|
| Inhibition rate 1 | 0.782 | 0.734 | 0.695 | -0.706 | 0.640 | 0.719 | -0.716 | -0.276 | 0.266 |
| Inhibition rate 2 | 0.726 | 0.677 | 0.638 | -0.649 | 0.567 | 0.686 | -0.635 | -0.325 | 0.149 |
*: Significant difference (P < 0.05)
**: Significant difference (P < 0.01).
Inhibition rate 1: Inhibition rate at a concentration of 0.5%; Inhibition rate 2: Inhibition rate at a concentration of 0.33%. 1: trilinolein; 2: 1,2-linolein-3-olein; 3: 1,2-linolein-3-palmitin; 4: 1,2-olein-3-linolein; 5: 1-palmitin-2-olein-3-linolein; 6: 1,3-palmitin-2-linolein; 7: triolein; 8: 1,2-olein-3-palmitin; 9: 1-palmitin-2-linolein-3-stearin.