| Literature DB >> 27069577 |
Daniela E Winkler1, Tolona H Andrianasolo2, Laza Andriamandimbiarisoa3, Jörg U Ganzhorn4, S Jacques Rakotondranary4, Thomas M Kaiser1, Ellen Schulz-Kornas5.
Abstract
Dietary characteristics and environmental variables are important selective factors directing ecological diversification in rodents. On Madagascar, the introductions and spread of the commensal black rat (Rattus rattus) can be seen as example cases to study dietary niche occupation and dietary adaptation in an insular environment. We investigate how tooth wear as a measure of dietary adaptation of black rats differs between four distinct habitats (village, manioc fields, spiny forest, and rainforest) with different dietary resources. We use the 3D surface texture analysis (3DST, using 30 parameters according to ISO 25178) as a measure of dietary abrasiveness. 3DST is applied on the occlusal surface of the upper first molar of 37 black rat specimens. The rainforest sample displays less rough and less voluminous surface textures compared to the village samples as indicated by smaller values for height parameters (Sa, Sp, Sq), inverse areal material ratio (Smc), and volume parameters (Vm, Vmc, Vmp, Vv, and Vvc). We therefore rank sampling areas from highest to lowest abrasiveness (village>manioc fields/spiny forest>rainforest). The rats from villages and rainforest differ to such an extent that one could have interpreted them to belong to different species. This indicates a high degree of variability in terms of ingesta abrasiveness. Furthermore, the pronounced difference between rats from human habitations compared to rats from associated fields or natural vegetation is interpreted to clearly indicate shifts in dietary niche occupation in relation to human impact.Entities:
Keywords: Anthropogenic; Black rat; Madagascar; diet; surface texture; tooth wear
Year: 2016 PMID: 27069577 PMCID: PMC4782253 DOI: 10.1002/ece3.2048
Source DB: PubMed Journal: Ecol Evol ISSN: 2045-7758 Impact factor: 2.912
Figure 1Representative images of the four sampling sites. (A) Spiny forest, (B) manioc fields, (C) village, and (D) rainforest.
Figure 2Occlusal view of an upper M1 of a black rat. The position of the measured facet at the mesial to lingual part of the hypocone is highlighted. Scale bar 1 mm.
Description, standard, and units of the applied parameters according to ISO 25178
| Acronym | Description | Unit | Standard | Parameter group |
|---|---|---|---|---|
|
| Ten‐point height of the surface |
| ISO 25178 | Feature |
|
| Five‐point peak height |
| ISO 25178 | Feature |
|
| Five‐point valley height |
| ISO 25178 | Feature |
|
| Arithmetical mean height |
| ISO 25178 | Height |
|
| Autocorrelation length |
| ISO 25178 | Spatial |
|
| Closed dale area |
| ISO 25178 | Feature |
|
| Root mean square gradient (slope) of the scale limited surface | No unit | ISO 25178 | Hybrid |
|
| Developed interfacial area ratio of the scale limited surface (indicator of complexity) | % | ISO 25178 | Hybrid |
|
| Closed dale volume |
| ISO 25178 | Feature |
|
| Closed hill area |
| ISO 25178 | Feature |
|
| Closed hill volume |
| ISO 25178 | Feature |
|
| Kurtosis | No unit | ISO 25178 | Height |
|
| Inverse areal material ratio ( |
| ISO 25178 | Functional |
|
| Surface bearing area ratio | % | ISO 25178 | Functional |
|
| Maximum peak height |
| ISO 25178 | Height |
|
| Arithmetic mean peak curvature | 1/ | ISO 25178 | Feature |
|
| Density of peaks | 1/ | ISO 25178 | Feature |
|
| Root mean square height of the surface |
| ISO 25178 | Height |
|
| Skewness | No unit | ISO 25178 | Height |
|
| Texture direction of the surface | ° | ISO 25178 | Spatial |
|
| Texture aspect ratio | No unit | ISO 25178 | Spatial |
|
| Maximum pit height |
| ISO 25178 | Height |
|
| Peak extreme height |
| ISO 25178 | Functional |
|
| Maximum height of the surface |
| ISO 25178 | Height |
|
| Material volume |
| ISO 25178 | Functional |
|
| Material volume of the core |
| ISO 25178 | Functional |
|
| Peak material volume |
| ISO 25178 | Functional |
|
| Void volume of a given height |
| ISO 25178 | Functional |
|
| Void volume of the core |
| ISO 25178 | Functional |
|
| Void volume of the valley |
| ISO 25178 | Functional |
Descriptive statistics (mean and SD = standard deviation) of surface texture parameters according to ISO (25178‐2) showing a significant difference between habitats
| Habitat |
| Surface texture parameters | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
|
|
|
|
|
|
|
| |||
| Manioc fields | 3 | Mean | 0.238 | 0.362 | 1.162 | 0.299 | 0.013 | 0.268 | 0.013 | 0.377 | 0.343 |
| SD | 0.109 | 0.161 | 0.830 | 0.129 | 0.007 | 0.128 | 0.007 | 0.168 | 0.156 | ||
| Spiny forest | 3 | Mean | 0.248 | 0.373 | 1.053 | 0.319 | 0.013 | 0.270 | 0.013 | 0.387 | 0.333 |
| SD | 0.107 | 0.193 | 0.655 | 0.142 | 0.009 | 0.112 | 0.009 | 0.204 | 0.199 | ||
| Rainforest | 12 | Mean | 0.173 | 0.258 | 0.801 | 0.229 | 0.009 | 0.189 | 0.009 | 0.267 | 0.231 |
| SD | 0.072 | 0.093 | 0.437 | 0.103 | 0.005 | 0.075 | 0.005 | 0.097 | 0.080 | ||
| Village | 19 | Mean | 0.269 | 0.411 | 1.248 | 0.350 | 0.014 | 0.294 | 0.014 | 0.426 | 0.376 |
| SD | 0.060 | 0.097 | 0.446 | 0.078 | 0.005 | 0.067 | 0.005 | 0.101 | 0.093 | ||
Figure 3Boxplots of significant 3DST parameters. (A) Mean surface roughness, (B) inverse areal material ratio, (C) maximum peak height, (D) standard deviation of the height distribution, (E) material volume at a given material ratio, (F) material volume of the core at given material ratio, (G) material volume of peaks, (H) void volume at given material ratio, and (I) void volume of the core. Significance levels: * = 0.05, ** = 0.01, *** = 0.001. Test statistics from Lincon.
Test statistics for Lincon test with 15% trimming (equivalent to Dunett's T3). Values in bold indicate a significant difference (P ≤ 0.05). All significant differences reported here are confirmed by Cliff's method (see appendix). t = test statistics, P = significance level, df = degree of freedom
| Group 1 | Group 2 |
|
|
|
| |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
| df |
|
| df |
|
| df |
|
| df | |||||
| Manioc fields | Spiny forest | 0.119 | 0.911 | 3.999 | 0.079 | 0.941 | 3.881 | 0.179 | 0.867 | 3.794 | 0.186 | 0.862 | 3.965 | |||
| Manioc fields | Rainforest | 1.122 | 0.364 | 2.326 | 1.148 | 0.355 | 2.334 | 0.907 | 0.455 | 2.133 | 1.068 | 0.379 | 2.468 | |||
| Manioc fields | Village | 0.444 | 0.697 | 2.201 | 0.455 | 0.690 | 2.190 | 0.071 | 0.949 | 2.244 | 0.636 | 0.584 | 2.236 | |||
| Spiny forest | Rainforest | 1.298 | 0.308 | 2.334 | 1.072 | 0.386 | 2.232 | 0.857 | 0.474 | 2.215 | 1.221 | 0.329 | 2.385 | |||
| Spiny forest | Village | 0.284 | 0.801 | 2.207 | 0.283 | 0.802 | 2.133 | 0.365 | 0.745 | 2.398 | 0.336 | 0.766 | 2.195 | |||
| Rainforest | Village | 4.523 |
| 18.986 | 4.644 |
| 18.411 | 3.274 |
| 22.871 | 4.319 |
| 17.616 | |||
|
|
|
|
|
| ||||||||||||
| Group 1 | Group 2 |
|
| df |
|
| df |
|
| df |
|
| df |
|
| df |
| Manioc fields | Spiny forest | 0.039 | 0.971 | 3.768 | 0.026 | 0.980 | 3.935 | 0.039 | 0.971 | 3.768 | 0.061 | 0.954 | 3.856 | 0.069 | 0.949 | 3.786 |
| Manioc fields | Rainforest | 1.354 | 0.299 | 2.182 | 1.143 | 0.360 | 2.248 | 1.354 | 0.299 | 2.182 | 1.188 | 0.342 | 2.319 | 1.263 | 0.321 | 2.268 |
| Manioc fields | Village | 0.243 | 0.827 | 2.506 | 0.297 | 0.792 | 2.176 | 0.243 | 0.827 | 2.506 | 0.432 | 0.705 | 2.196 | 0.293 | 0.795 | 2.172 |
| Spiny forest | Rainforest | 1.011 | 0.414 | 2.109 | 1.328 | 0.299 | 2.323 | 1.011 | 0.414 | 2.109 | 1.065 | 0.389 | 2.214 | 0.918 | 0.449 | 2.164 |
| Spiny forest | Village | 0.240 | 0.830 | 2.299 | 0.298 | 0.792 | 2.229 | 0.240 | 0.830 | 2.299 | 0.280 | 0.804 | 2.132 | 0.318 | 0.779 | 2.105 |
| Rainforest | Village | 4.034 |
| 21.679 | 4.600 |
| 19.897 | 4.034 |
| 21.679 | 4.728 |
| 18.929 | 4.882 |
| 19.235 |
Test statistics from Welch–Yuen test with 15% trimming. Values in bold indicate a significant difference (P ≤ 0.05). Ft = test statistics, nu1 and nu2 = 1st and 2nd degree of freedom, respectively, P = significance level
| Parameter |
|
| nu1 | nu2 |
|---|---|---|---|---|
|
| 1.496 | 0.311 | 2 | 4.928 |
|
| 1.897 | 0.242 | 2 | 5.121 |
|
| 0.084 | 0.920 | 2 | 5.403 |
|
| 5.418 |
| 3 | 4.996 |
|
| 2.540 | 0.144 | 3 | 6.662 |
|
| 1.279 | 0.370 | 3 | 5.445 |
|
| 0.491 | 0.701 | 3 | 5.963 |
|
| 0.465 | 0.717 | 3 | 6.081 |
|
| 1.092 | 0.433 | 3 | 5.023 |
|
| 2.681 | 0.135 | 2 | 7.220 |
|
| 3.335 | 0.121 | 2 | 4.968 |
|
| 0.893 | 0.489 | 3 | 7.194 |
|
| 5.678 |
| 3 | 4.945 |
|
| 1.690 | 0.282 | 3 | 5.096 |
|
| 2.950 | 0.137 | 3 | 5.016 |
|
| 0.626 | 0.626 | 3 | 5.500 |
|
| 1.852 | 0.236 | 3 | 6.146 |
|
| 4.922 | 0.059 | 3 | 5.009 |
|
| 4.558 | 0.061 | 3 | 5.451 |
|
| 0.355 | 0.787 | 3 | 7.277 |
|
| 3.679 | 0.077 | 3 | 6.390 |
|
| 0.342 | 0.796 | 3 | 6.446 |
|
| 3.914 | 0.084 | 3 | 5.239 |
|
| 0.920 | 0.489 | 3 | 5.582 |
|
| 4.618 | 0.066 | 3 | 4.996 |
|
| 5.629 |
| 3 | 4.993 |
|
| 4.618 |
| 3 | 4.996 |
|
| 5.894 |
| 3 | 4.949 |
|
| 6.285 |
| 3 | 4.921 |
|
| 2.752 | 0.144 | 3 | 5.394 |
Test statistics for significant parameters from Cliff's method. p.hat = test statistics, p.ci.lower = lower 95% confidence interval, p.ci.upper = upper 95% confidence interval, P = significance level, p.crit = critical significance level, adjusted for family‐wise error
| Group 1 | Group 2 |
|
|
|
|
|
|---|---|---|---|---|---|---|
|
| ||||||
| Manioc fields | Spiny forest | 0.556 | 0.136 | 0.909 | 0.860 | 0.050 |
| Manioc fields | Rainforest | 0.278 | 0.068 | 0.669 | 0.300 | 0.013 |
| Manioc fields | Village | 0.632 | 0.176 | 0.932 | 0.670 | 0.025 |
| Spiny forest | Rainforest | 0.250 | 0.063 | 0.624 | 0.210 | 0.010 |
| Spiny forest | Village | 0.632 | 0.176 | 0.932 | 0.670 | 0.017 |
| Rainforest | Village | 0.864 | 0.633 | 0.959 | 0.003 | 0.008 |
|
| ||||||
| Manioc fields | Spiny forest | 0.444 | 0.091 | 0.864 | 0.860 | 0.050 |
| Manioc fields | Rainforest | 0.306 | 0.081 | 0.686 | 0.360 | 0.013 |
| Manioc fields | Village | 0.649 | 0.196 | 0.933 | 0.610 | 0.017 |
| Spiny forest | Rainforest | 0.306 | 0.081 | 0.686 | 0.360 | 0.010 |
| Spiny forest | Village | 0.632 | 0.176 | 0.932 | 0.670 | 0.025 |
| Rainforest | Village | 0.877 | 0.693 | 0.958 | <0.000 | 0.008 |
|
| ||||||
| Manioc fields | Spiny forest | 0.444 | 0.091 | 0.864 | 0.860 | 0.050 |
| Manioc fields | Rainforest | 0.333 | 0.095 | 0.705 | 0.430 | 0.010 |
| Manioc fields | Village | 0.684 | 0.178 | 0.956 | 0.590 | 0.017 |
| Spiny forest | Rainforest | 0.417 | 0.138 | 0.761 | 0.690 | 0.025 |
| Spiny forest | Village | 0.719 | 0.216 | 0.960 | 0.490 | 0.013 |
| Rainforest | Village | 0.838 | 0.617 | 0.943 | 0.004 | 0.008 |
|
| ||||||
| Manioc fields | Spiny forest | 0.667 | 0.203 | 0.940 | 0.580 | 0.017 |
| Manioc fields | Rainforest | 0.306 | 0.089 | 0.665 | 0.320 | 0.013 |
| Manioc fields | Village | 0.649 | 0.196 | 0.933 | 0.610 | 0.025 |
| Spiny forest | Rainforest | 0.250 | 0.063 | 0.624 | 0.210 | 0.010 |
| Spiny forest | Village | 0.632 | 0.176 | 0.932 | 0.670 | 0.050 |
| Rainforest | Village | 0.846 | 0.620 | 0.949 | 0.004 | 0.008 |
|
| ||||||
| Manioc fields | Spiny forest | 0.556 | 0.136 | 0.909 | 0.860 | 0.050 |
| Manioc fields | Rainforest | 0.194 | 0.057 | 0.493 | 0.045 | 0.010 |
| Manioc fields | Village | 0.614 | 0.218 | 0.901 | 0.650 | 0.017 |
| Spiny forest | Rainforest | 0.306 | 0.089 | 0.665 | 0.320 | 0.013 |
| Spiny forest | Village | 0.614 | 0.174 | 0.923 | 0.710 | 0.025 |
| Rainforest | Village | 0.846 | 0.608 | 0.951 | 0.006 | 0.008 |
|
| ||||||
| Manioc fields | Spiny forest | 0.444 | 0.091 | 0.864 | 0.860 | 0.050 |
| Manioc fields | Rainforest | 0.222 | 0.041 | 0.658 | 0.240 | 0.013 |
| Manioc fields | Village | 0.632 | 0.176 | 0.932 | 0.670 | 0.017 |
| Spiny forest | Rainforest | 0.250 | 0.067 | 0.606 | 0.180 | 0.010 |
| Spiny forest | Village | 0.614 | 0.177 | 0.922 | 0.700 | 0.025 |
| Rainforest | Village | 0.873 | 0.658 | 0.961 | 0.002 | 0.008 |
|
| ||||||
| Manioc fields | Spiny forest | 0.556 | 0.136 | 0.909 | 0.860 | 0.050 |
| Manioc fields | Rainforest | 0.194 | 0.057 | 0.493 | 0.045 | 0.010 |
| Manioc fields | Village | 0.614 | 0.218 | 0.901 | 0.650 | 0.017 |
| Spiny forest | Rainforest | 0.306 | 0.089 | 0.665 | 0.320 | 0.013 |
| Spiny forest | Village | 0.614 | 0.174 | 0.923 | 0.710 | 0.025 |
| Rainforest | Village | 0.846 | 0.608 | 0.951 | 0.006 | 0.008 |
|
| ||||||
| Manioc fields | Spiny forest | 0.444 | 0.091 | 0.864 | 0.860 | 0.050 |
| Manioc fields | Rainforest | 0.306 | 0.081 | 0.686 | 0.360 | 0.013 |
| Manioc fields | Village | 0.649 | 0.196 | 0.933 | 0.610 | 0.017 |
| Spiny forest | Rainforest | 0.306 | 0.081 | 0.686 | 0.360 | 0.010 |
| Spiny forest | Village | 0.632 | 0.176 | 0.932 | 0.670 | 0.025 |
| Rainforest | Village | 0.873 | 0.676 | 0.958 | 0.001 | 0.008 |
|
| ||||||
| Manioc fields | Spiny forest | 0.444 | 0.091 | 0.864 | 0.860 | 0.050 |
| Manioc fields | Rainforest | 0.306 | 0.081 | 0.686 | 0.360 | 0.013 |
| Manioc fields | Village | 0.614 | 0.177 | 0.922 | 0.700 | 0.025 |
| Spiny forest | Rainforest | 0.306 | 0.081 | 0.686 | 0.360 | 0.010 |
| Spiny forest | Village | 0.649 | 0.178 | 0.940 | 0.640 | 0.017 |
| Rainforest | Village | 0.882 | 0.702 | 0.959 | <0.000 | 0.008 |