Literature DB >> 27066575

LGMD phenotype due to a new gene and dysferlinopathy investigated by next-generation sequencing.

Corrado I Angelini1.   

Abstract

In this issue of Neurology® Genetics, Endo et al.(1) report 3 cases of limb-girdle muscular dystrophy (LGMD) phenotype with mental retardation or hyperCKemia found by next-generation sequencing (NGS) to have a variant in the POMGNT2 gene, which has so far been recognized only as causing congenital muscular dystrophy (CMD).

Entities:  

Year:  2015        PMID: 27066575      PMCID: PMC4811386          DOI: 10.1212/NXG.0000000000000039

Source DB:  PubMed          Journal:  Neurol Genet        ISSN: 2376-7839


In this issue of Neurology® Genetics, Endo et al.[1] report 3 cases of limb-girdle muscular dystrophy (LGMD) phenotype with mental retardation or hyperCKemia found by next-generation sequencing (NGS) to have a variant in the POMGNT2 gene, which has so far been recognized only as causing congenital muscular dystrophy (CMD). The glycosyl transferases participate in α-dystroglycan glycosylation and form α-dystroglycan-dystrophin complex. The deficiency in many glycosyl transferases causes both CMD and LGMD phenotypes. In this particular transferase, there was only a report of a severe Walker-Warburg syndrome described by Manzini et al.[2] It is notable that onset was early in these new LGMD cases, occurring in the first years in 2 cases, with low IQ, resolved developmental delay, and walking ability. This issue also reports the use of NGS by Izumi et al.[3] in a series of LGMD/distal myopathies, both with a phenotype of dysferlinopathy (i.e., teenage-to-adult–onset myopathy, with high creatine kinase and no cardiac abnormalities) and in previously diagnosed persons in whom dysferlin gene mutations have been already identified by the single-strand conformation polymorphism method. This NGS screening resulted in the identification of 12 new dysferlinopathy cases and 9 cases with calpain-3 gene mutations. The only limitation of this NGS screening is the lack of validation on messenger RNA (mRNA) because muscle samples were not available due to the great East Japan earthquake. The term LGMD defines a progressive weakness with onset in the proximal limb-girdle muscles, with age at onset of symptoms varying from early childhood (not congenital) to late adulthood. The progression of muscle weakness is usually symmetrical and variable among individuals and genetic type. The term LGMD, used to molecularly classify the disease, is, however, inappropriate for many patients when it is used to describe the clinical severity. Indeed, these disorders present a wide spectrum of muscle involvement and wasting, spanning from very severe forms, such as those with childhood onset and rapid progression, to relatively benign forms with late onset. The clinical phenotypes due to mutation in the LGMD genes include severe childhood-onset forms, distal and proximal myopathies, pseudometabolic myopathies, eosinophilic myositis, and hyperCKemia. Furthermore, patients with a clinically typical LGMD phenotype might carry mutations in the gene encoding emerin, which usually cause Emery-Dreifuss muscular dystrophy (EDMD) phenotype. Because there is a spectrum of phenotypes under the same genetic entity and a wide genetic heterogeneity under the same phenotype, it is crucial to identify suitable selection criteria to be used when screening patients for the proteins and genes responsible for LGMD. As LGMD is relatively rare in most populations, other more likely diagnoses need to be excluded. Among these, dystrophinopathies (Duchenne dystrophy, Becker dystrophy, and female carriers of Duchenne dystrophy) are the most relevant, and these diagnoses can be ruled out based on dystrophin protein testing and/or DNA mutation analysis in the dystrophin gene. Another diagnosis that can usually be resolved by DNA analysis is facioscapulohumeral muscular dystrophy (FSHD): about 8% of patients with a diagnosis of LGMD may actually have FSHD, and the misdiagnosis can occur in families with autosomal dominant inheritance, especially when both pelvic and shoulder girdles are involved and facial weakness is minimal. Molecular investigation to exclude FSHD is worthwhile, especially in patients with a positive family history. EDMD, which is characterized by the triad of joint contractures of early onset, slowly progressive muscle weakness, and cardiac involvement, may be due to mutations in the emerin gene (X-linked) or in the lamin A/C gene (autosomal dominant, allelic with LGMD1B). Additional differential diagnoses may be inflammatory myopathies, myofibrillar myopathies, and metabolic myopathies, which can also be excluded on the basis of muscle histopathology. Muscle imaging (CT scan and MRI) may be helpful to characterize the severity and the pattern and distribution of muscle wasting. The milder the symptoms, the more difficult the diagnosis. The new NGS technique yields considerable advancement and allows the diagnosis of LGMD and hyperCKemia, making it a powerful technique for practitioners. However, its cost-effectiveness has yet to be demonstrated, because in the case of known genes such as dysferlin, if muscle is available, it is preferable to perform dysferlin Western blotting, which is specific in all cases in which a severe protein defect is detected.[4] In fact, the recent American Academy of Neurology guidelines for LGMD suggest the use of NGS as a last resort.[5] Moreover, in dysferlinopathy, one does not need muscle tissue because the dysferlin protein can also be studied in monocytes by Western blotting, followed by multiplex ligation-dependent probe amplification analysis of the gene. Therefore, here again, analysis of dysferlin mRNA can be helpful for distinguishing symptomatic heterozygotes from affected patients.[6]
  6 in total

1.  Evidence-based guideline summary: diagnosis and treatment of limb-girdle and distal dystrophies: report of the guideline development subcommittee of the American Academy of Neurology and the practice issues review panel of the American Association of Neuromuscular & Electrodiagnostic Medicine.

Authors:  Pushpa Narayanaswami; Michael Weiss; Duygu Selcen; William David; Elizabeth Raynor; Gregory Carter; Matthew Wicklund; Richard J Barohn; Erik Ensrud; Robert C Griggs; Gary Gronseth; Anthony A Amato
Journal:  Neurology       Date:  2014-10-14       Impact factor: 9.910

2.  Exome sequencing and functional validation in zebrafish identify GTDC2 mutations as a cause of Walker-Warburg syndrome.

Authors:  M Chiara Manzini; Dimira E Tambunan; R Sean Hill; Tim W Yu; Thomas M Maynard; Erin L Heinzen; Kevin V Shianna; Christine R Stevens; Jennifer N Partlow; Brenda J Barry; Jacqueline Rodriguez; Vandana A Gupta; Abdel-Karim Al-Qudah; Wafaa M Eyaid; Jan M Friedman; Mustafa A Salih; Robin Clark; Isabella Moroni; Marina Mora; Alan H Beggs; Stacey B Gabriel; Christopher A Walsh
Journal:  Am J Hum Genet       Date:  2012-09-07       Impact factor: 11.025

3.  Abnormal expression of dysferlin in skeletal muscle and monocytes supports primary dysferlinopathy in patients with one mutated allele.

Authors:  M Meznaric; L Gonzalez-Quereda; E Gallardo; N de Luna; P Gallano; M Fanin; C Angelini; B Peterlin; J Zidar
Journal:  Eur J Neurol       Date:  2010-10-18       Impact factor: 6.089

4.  Muscular dystrophy with marked Dysferlin deficiency is consistently caused by primary dysferlin gene mutations.

Authors:  Mafalda Cacciottolo; Gelsomina Numitone; Stefania Aurino; Imma Rosaria Caserta; Marina Fanin; Luisa Politano; Carlo Minetti; Enzo Ricci; Giulio Piluso; Corrado Angelini; Vincenzo Nigro
Journal:  Eur J Hum Genet       Date:  2011-04-27       Impact factor: 4.246

5.  Milder forms of muscular dystrophy associated with POMGNT2 mutations.

Authors:  Yukari Endo; Mingrui Dong; Satoru Noguchi; Megumu Ogawa; Yukiko K Hayashi; Satoshi Kuru; Kenji Sugiyama; Shigehiro Nagai; Shiro Ozasa; Ikuya Nonaka; Ichizo Nishino
Journal:  Neurol Genet       Date:  2015-12-10

6.  Genetic profile for suspected dysferlinopathy identified by targeted next-generation sequencing.

Authors:  Rumiko Izumi; Tetsuya Niihori; Toshiaki Takahashi; Naoki Suzuki; Maki Tateyama; Chigusa Watanabe; Kazuma Sugie; Hirotaka Nakanishi; Gen Sobue; Masaaki Kato; Hitoshi Warita; Yoko Aoki; Masashi Aoki
Journal:  Neurol Genet       Date:  2015-12-10
  6 in total
  3 in total

1.  Identification of an intragenic deletion in the SGCB gene through a re-evaluation of negative next generation sequencing results.

Authors:  Teresa Giugliano; Marina Fanin; Marco Savarese; Giulio Piluso; Corrado Angelini; Vincenzo Nigro
Journal:  Neuromuscul Disord       Date:  2016-03-31       Impact factor: 4.296

2.  Whole-exome sequencing in neurologic practice: Reducing the diagnostic odyssey.

Authors:  Nicholas E Johnson
Journal:  Neurol Genet       Date:  2015-12-24

3.  Copy Number Variants Account for a Tiny Fraction of Undiagnosed Myopathic Patients.

Authors:  Teresa Giugliano; Marco Savarese; Arcomaria Garofalo; Esther Picillo; Chiara Fiorillo; Adele D'Amico; Lorenzo Maggi; Lucia Ruggiero; Liliana Vercelli; Francesca Magri; Fabiana Fattori; Annalaura Torella; Manuela Ergoli; Anna Rubegni; Marina Fanin; Olimpia Musumeci; Jan De Bleecker; Lorenzo Peverelli; Maurizio Moggio; Eugenio Mercuri; Antonio Toscano; Marina Mora; Lucio Santoro; Tiziana Mongini; Enrico Bertini; Claudio Bruno; Carlo Minetti; Giacomo Pietro Comi; Filippo Maria Santorelli; Corrado Angelini; Luisa Politano; Giulio Piluso; Vincenzo Nigro
Journal:  Genes (Basel)       Date:  2018-10-26       Impact factor: 4.096

  3 in total

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