Literature DB >> 27066302

The challenge of ORF1p phosphorylation: Effects on L1 activity and its host.

Anthony V Furano1, Pamela R Cook1.   

Abstract

L1 non-LTR retrotransposons are autonomously replicating genetic elements that profoundly affected their mammalian hosts having generated upwards of 40% or more of their genomes. Although deleterious, they remain active in most mammalian species, and thus the nature and consequences of the interaction between L1 and its host remain major issues for mammalian biology. We recently showed that L1 activity requires phosphorylation of one of its 2 encoded proteins, ORF1p, a nucleic acid chaperone and the major component of the L1RNP retrotransposition intermediate. Reversible protein phosphorylation, which is effected by interacting cascades of protein kinases, phosphatases, and ancillary proteins, is a mainstay in the regulation and coordination of many basic biological processes. Therefore, demonstrating phosphorylation-dependence of L1 activity substantially enlarged our knowledge of the scope of L1 / host interaction. However, developing a mechanistic understanding of what this means for L1 or its host is a formidable challenge, which we discuss here.

Entities:  

Keywords:  L1 retrotransposon; Pin1; intrinsically disordered region; peptidyl prolyl isomerase 1; proline-directed protein kinase

Year:  2015        PMID: 27066302      PMCID: PMC4802804          DOI: 10.1080/2159256X.2015.1119927

Source DB:  PubMed          Journal:  Mob Genet Elements        ISSN: 2159-2543


  71 in total

1.  Initial sequencing and analysis of the human genome.

Authors:  E S Lander; L M Linton; B Birren; C Nusbaum; M C Zody; J Baldwin; K Devon; K Dewar; M Doyle; W FitzHugh; R Funke; D Gage; K Harris; A Heaford; J Howland; L Kann; J Lehoczky; R LeVine; P McEwan; K McKernan; J Meldrim; J P Mesirov; C Miranda; W Morris; J Naylor; C Raymond; M Rosetti; R Santos; A Sheridan; C Sougnez; Y Stange-Thomann; N Stojanovic; A Subramanian; D Wyman; J Rogers; J Sulston; R Ainscough; S Beck; D Bentley; J Burton; C Clee; N Carter; A Coulson; R Deadman; P Deloukas; A Dunham; I Dunham; R Durbin; L French; D Grafham; S Gregory; T Hubbard; S Humphray; A Hunt; M Jones; C Lloyd; A McMurray; L Matthews; S Mercer; S Milne; J C Mullikin; A Mungall; R Plumb; M Ross; R Shownkeen; S Sims; R H Waterston; R K Wilson; L W Hillier; J D McPherson; M A Marra; E R Mardis; L A Fulton; A T Chinwalla; K H Pepin; W R Gish; S L Chissoe; M C Wendl; K D Delehaunty; T L Miner; A Delehaunty; J B Kramer; L L Cook; R S Fulton; D L Johnson; P J Minx; S W Clifton; T Hawkins; E Branscomb; P Predki; P Richardson; S Wenning; T Slezak; N Doggett; J F Cheng; A Olsen; S Lucas; C Elkin; E Uberbacher; M Frazier; R A Gibbs; D M Muzny; S E Scherer; J B Bouck; E J Sodergren; K C Worley; C M Rives; J H Gorrell; M L Metzker; S L Naylor; R S Kucherlapati; D L Nelson; G M Weinstock; Y Sakaki; A Fujiyama; M Hattori; T Yada; A Toyoda; T Itoh; C Kawagoe; H Watanabe; Y Totoki; T Taylor; J Weissenbach; R Heilig; W Saurin; F Artiguenave; P Brottier; T Bruls; E Pelletier; C Robert; P Wincker; D R Smith; L Doucette-Stamm; M Rubenfield; K Weinstock; H M Lee; J Dubois; A Rosenthal; M Platzer; G Nyakatura; S Taudien; A Rump; H Yang; J Yu; J Wang; G Huang; J Gu; L Hood; L Rowen; A Madan; S Qin; R W Davis; N A Federspiel; A P Abola; M J Proctor; R M Myers; J Schmutz; M Dickson; J Grimwood; D R Cox; M V Olson; R Kaul; C Raymond; N Shimizu; K Kawasaki; S Minoshima; G A Evans; M Athanasiou; R Schultz; B A Roe; F Chen; H Pan; J Ramser; H Lehrach; R Reinhardt; W R McCombie; M de la Bastide; N Dedhia; H Blöcker; K Hornischer; G Nordsiek; R Agarwala; L Aravind; J A Bailey; A Bateman; S Batzoglou; E Birney; P Bork; D G Brown; C B Burge; L Cerutti; H C Chen; D Church; M Clamp; R R Copley; T Doerks; S R Eddy; E E Eichler; T S Furey; J Galagan; J G Gilbert; C Harmon; Y Hayashizaki; D Haussler; H Hermjakob; K Hokamp; W Jang; L S Johnson; T A Jones; S Kasif; A Kaspryzk; S Kennedy; W J Kent; P Kitts; E V Koonin; I Korf; D Kulp; D Lancet; T M Lowe; A McLysaght; T Mikkelsen; J V Moran; N Mulder; V J Pollara; C P Ponting; G Schuler; J Schultz; G Slater; A F Smit; E Stupka; J Szustakowki; D Thierry-Mieg; J Thierry-Mieg; L Wagner; J Wallis; R Wheeler; A Williams; Y I Wolf; K H Wolfe; S P Yang; R F Yeh; F Collins; M S Guyer; J Peterson; A Felsenfeld; K A Wetterstrand; A Patrinos; M J Morgan; P de Jong; J J Catanese; K Osoegawa; H Shizuya; S Choi; Y J Chen; J Szustakowki
Journal:  Nature       Date:  2001-02-15       Impact factor: 49.962

2.  Exon shuffling by L1 retrotransposition.

Authors:  J V Moran; R J DeBerardinis; H H Kazazian
Journal:  Science       Date:  1999-03-05       Impact factor: 47.728

3.  Selection against deleterious LINE-1-containing loci in the human lineage.

Authors:  S Boissinot; A Entezam; A V Furano
Journal:  Mol Biol Evol       Date:  2001-06       Impact factor: 16.240

4.  Intrinsic disorder and protein function.

Authors:  A Keith Dunker; Celeste J Brown; J David Lawson; Lilia M Iakoucheva; Zoran Obradović
Journal:  Biochemistry       Date:  2002-05-28       Impact factor: 3.162

5.  L1 (LINE-1) retrotransposon evolution and amplification in recent human history.

Authors:  S Boissinot; P Chevret; A V Furano
Journal:  Mol Biol Evol       Date:  2000-06       Impact factor: 16.240

6.  Function of WW domains as phosphoserine- or phosphothreonine-binding modules.

Authors:  P J Lu; X Z Zhou; M Shen; K P Lu
Journal:  Science       Date:  1999-02-26       Impact factor: 47.728

7.  Human L1 retrotransposition: cis preference versus trans complementation.

Authors:  W Wei; N Gilbert; S L Ooi; J F Lawler; E M Ostertag; H H Kazazian; J D Boeke; J V Moran
Journal:  Mol Cell Biol       Date:  2001-02       Impact factor: 4.272

8.  Critical role of WW domain phosphorylation in regulating phosphoserine binding activity and Pin1 function.

Authors:  Pei-Jung Lu; Xiao Zhen Zhou; Yih-Cherng Liou; Joseph P Noel; Kun Ping Lu
Journal:  J Biol Chem       Date:  2001-11-26       Impact factor: 5.157

Review 9.  The biological properties and evolutionary dynamics of mammalian LINE-1 retrotransposons.

Authors:  A V Furano
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  2000

Review 10.  Pinning down proline-directed phosphorylation signaling.

Authors:  Kun Ping Lu; Yih Cherng Liou; Xiao Zhen Zhou
Journal:  Trends Cell Biol       Date:  2002-04       Impact factor: 20.808

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  5 in total

1.  The L1-ORF1p coiled coil enables formation of a tightly compacted nucleic acid-bound complex that is associated with retrotransposition.

Authors:  Ben A Cashen; M Nabuan Naufer; Michael Morse; Charles E Jones; Mark C Williams; Anthony V Furano
Journal:  Nucleic Acids Res       Date:  2022-08-26       Impact factor: 19.160

Review 2.  Melatonin: Regulation of Viral Phase Separation and Epitranscriptomics in Post-Acute Sequelae of COVID-19.

Authors:  Doris Loh; Russel J Reiter
Journal:  Int J Mol Sci       Date:  2022-07-23       Impact factor: 6.208

Review 3.  Protein-nucleic acid interactions of LINE-1 ORF1p.

Authors:  M Nabuan Naufer; Anthony V Furano; Mark C Williams
Journal:  Semin Cell Dev Biol       Date:  2018-03-31       Impact factor: 7.727

4.  Resveratrol blocks retrotransposition of LINE-1 through PPAR α and sirtuin-6.

Authors:  Noriyuki Okudaira; Yukihito Ishizaka; Mimi Tamamori-Adachi
Journal:  Sci Rep       Date:  2022-05-11       Impact factor: 4.996

5.  LINE-1 couples EMT programming with acquisition of oncogenic phenotypes in human bronchial epithelial cells.

Authors:  Elsa M Reyes-Reyes; Ivan Aispuro; Marco A Tavera-Garcia; Matthew Field; Sara Moore; Irma Ramos; Kenneth S Ramos
Journal:  Oncotarget       Date:  2017-10-23
  5 in total

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