Literature DB >> 27063780

Oilseed rape: learning about ancient and recent polyploid evolution from a recent crop species.

A S Mason1, R J Snowdon2.   

Abstract

Oilseed rape (Brassica napus) is one of our youngest crop species, arising several times under cultivation in the last few thousand years and completely unknown in the wild. Oilseed rape originated from hybridisation events between progenitor diploid species B. rapa and B. oleracea, both important vegetable species. The diploid progenitors are also ancient polyploids, with remnants of two previous polyploidisation events evident in the triplicated genome structure. This history of polyploid evolution and human agricultural selection makes B. napus an excellent model with which to investigate processes of genomic evolution and selection in polyploid crops. The ease of de novo interspecific hybridisation, responsiveness to tissue culture, and the close relationship of oilseed rape to the model plant Arabidopsis thaliana, coupled with the recent availability of reference genome sequences and suites of molecular cytogenetic and high-throughput genotyping tools, allow detailed dissection of genetic, genomic and phenotypic interactions in this crop. In this review we discuss the past and present uses of B. napus as a model for polyploid speciation and evolution in crop species, along with current and developing analysis tools and resources. We further outline unanswered questions that may now be tractable to investigation.
© 2016 German Botanical Society and The Royal Botanical Society of the Netherlands.

Entities:  

Keywords:  Brassica; cytogenetics; evolution; genome structure; genotyping; rapeseed

Mesh:

Year:  2016        PMID: 27063780     DOI: 10.1111/plb.12462

Source DB:  PubMed          Journal:  Plant Biol (Stuttg)        ISSN: 1435-8603            Impact factor:   3.081


  19 in total

1.  Origin and Evolution of Diploid and Allopolyploid Camelina Genomes Were Accompanied by Chromosome Shattering.

Authors:  Terezie Mandáková; Milan Pouch; Jordan R Brock; Ihsan A Al-Shehbaz; Martin A Lysak
Journal:  Plant Cell       Date:  2019-08-26       Impact factor: 11.277

Review 2.  Perspectives for integrated insect pest protection in oilseed rape breeding.

Authors:  Christian Obermeier; Annaliese S Mason; Torsten Meiners; Georg Petschenka; Michael Rostás; Torsten Will; Benjamin Wittkop; Nadine Austel
Journal:  Theor Appl Genet       Date:  2022-03-16       Impact factor: 5.699

Review 3.  Connecting genome structural variation with complex traits in crop plants.

Authors:  Iulian Gabur; Harmeet Singh Chawla; Rod J Snowdon; Isobel A P Parkin
Journal:  Theor Appl Genet       Date:  2018-11-17       Impact factor: 5.699

Review 4.  Using wild relatives and related species to build climate resilience in Brassica crops.

Authors:  Daniela Quezada-Martinez; Charles P Addo Nyarko; Sarah V Schiessl; Annaliese S Mason
Journal:  Theor Appl Genet       Date:  2021-03-17       Impact factor: 5.699

Review 5.  Current Status and Challenges in Identifying Disease Resistance Genes in Brassica napus.

Authors:  Ting Xiang Neik; Martin J Barbetti; Jacqueline Batley
Journal:  Front Plant Sci       Date:  2017-11-06       Impact factor: 5.753

Review 6.  Exploring and Harnessing Haplotype Diversity to Improve Yield Stability in Crops.

Authors:  Lunwen Qian; Lee T Hickey; Andreas Stahl; Christian R Werner; Ben Hayes; Rod J Snowdon; Kai P Voss-Fels
Journal:  Front Plant Sci       Date:  2017-09-05       Impact factor: 5.753

7.  Targeted deep sequencing of flowering regulators in Brassica napus reveals extensive copy number variation.

Authors:  Sarah Schiessl; Bruno Huettel; Diana Kuehn; Richard Reinhardt; Rod J Snowdon
Journal:  Sci Data       Date:  2017-03-14       Impact factor: 6.444

8.  CRISPR/Cas9-mediated genome editing efficiently creates specific mutations at multiple loci using one sgRNA in Brassica napus.

Authors:  Hong Yang; Jia-Jing Wu; Ting Tang; Ke-De Liu; Cheng Dai
Journal:  Sci Rep       Date:  2017-08-08       Impact factor: 4.379

9.  Genome-wide identification, putative functionality and interactions between lncRNAs and miRNAs in Brassica species.

Authors:  Jinfang Zhang; Lijuan Wei; Jun Jiang; Annaliese S Mason; Haojie Li; Cheng Cui; Liang Chai; Benchuan Zheng; Yongqing Zhu; Qing Xia; Liangcai Jiang; Donghui Fu
Journal:  Sci Rep       Date:  2018-03-21       Impact factor: 4.379

10.  DNA repair- and nucleotide metabolism-related genes exhibit differential CHG methylation patterns in natural and synthetic polyploids (Brassica napus L.).

Authors:  Liqin Yin; Zhendong Zhu; Liangjun Huang; Xuan Luo; Yun Li; Chaowen Xiao; Jin Yang; Jisheng Wang; Qiong Zou; Lanrong Tao; Zeming Kang; Rong Tang; Maolin Wang; Shaohong Fu
Journal:  Hortic Res       Date:  2021-07-01       Impact factor: 6.793

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