Literature DB >> 27061820

Conformational preferences and synthesis of isomers Z and E of oxazole-dehydrophenylalanine.

Monika Staś1, Maciej Bujak1, Małgorzata A Broda1, Dawid Siodłak1.   

Abstract

Dehydrophenylalanine, ΔPhe, is the most commonly studied α,β-dehydroamino acid. In nature, further modifications of the α,β-dehydroamino acids were found, for example, replacement of the C-terminal amide group by oxazole ring. The conformational properties of oxazole-dehydrophenylalanine residue (ΔPhe-Ozl), both isomers Z and E, were investigated. To determine all possible conformations, theoretical calculations were performed using Ac-(Z/E)-ΔPhe-Ozl(4-Me) model compounds at M06-2X/6-31++G(d,p) level of theory. Ac-(Z/E)-ΔPhe-Ozl-4-COOEt compounds were synthesized and the conformational preferences of each isomer, Z and E, were investigated using FTIR and NMR-NOE in solutions of increasing polarity (CHCl3 , DMSO-d6). The solid-state low-temperature structures of Ac-(Z)-ΔPhe-Ozl-4-COOEt and its intermediate analog Ac-(Z)-ΔPhe-Ozn(4-OH)-4-COOEt were also determined. In a weakly polar environment, the ΔPhe-Ozl residue has a tendency to adopt the conformation β2 with the calculated φ and ψ angles of -127° and 0° for the isomer Z and -170° and 26° for the isomer E. The increase of environment polarity favors the helical conformation α and the beta-turn like conformation β, but the conformation β2 seems to be still accessible. The (E)-ΔPhe-Ozl residue can be obtained from the isomer Z in photoisomerization reaction. However, hydroxyl-oxazoline-dehydrophenylalanine ΔPhe-Ozn(4-OH) decomposes in such conditions. Alternatively, (E)-ΔPhe-NH2 can be applied as a substrate in the Hantzsch reaction.
© 2016 Wiley Periodicals, Inc. Biopolymers (Pept Sci) 106: 283-294, 2016. © 2016 Wiley Periodicals, Inc.

Entities:  

Keywords:  Hantzsch reaction; Ramachandran diagram; cis-trans isomerization; dehydroamino acids; photoisomerization

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Year:  2016        PMID: 27061820     DOI: 10.1002/bip.22852

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  2 in total

1.  Synthesis of Tetrapeptides Containing Dehydroalanine, Dehydrophenylalanine and Oxazole as Building Blocks for Construction of Foldamers and Bioinspired Catalysts.

Authors:  Paweł Lenartowicz; Maarten Beelen; Maciej Makowski; Weronika Wanat; Błażej Dziuk; Paweł Kafarski
Journal:  Molecules       Date:  2022-04-19       Impact factor: 4.927

2.  Thiazole-amino acids: influence of thiazole ring on conformational properties of amino acid residues.

Authors:  Monika Staś; Małgorzata A Broda; Dawid Siodłak
Journal:  Amino Acids       Date:  2021-04-10       Impact factor: 3.520

  2 in total

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