Literature DB >> 27060777

Probing the living ocean with ecogenomic sensors.

Elizabeth A Ottesen1.   

Abstract

This review discusses the role of ecogenomic sensors in biological oceanography. Ecogenomic sensors are instruments that can autonomously collect biological samples and perform molecular analyses. This technology reduces logistical constraints on the length and duration of biological data collection. Autonomous, robotic performance of molecular assays shows particular promise in the field of public health. Recent applications include simultaneous detection of harmful algal species and fecal markers paired with same-day remote reporting of test results. Ecogenomic instruments are also showing promise for molecular ecological studies. Autonomous collection and preservation of biological samples is facilitating high-resolution ecological studies that are expanding our understanding of marine microbial ecology and dynamics. This review discusses recent applications of these instruments and makes recommendations for future developments.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2016        PMID: 27060777     DOI: 10.1016/j.mib.2016.03.012

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  6 in total

1.  Recommendations for developing and applying genetic tools to assess and manage biological invasions in marine ecosystems.

Authors:  John A Darling; Bella S Galil; Gary R Carvalho; Marc Rius; Frédérique Viard; Stefano Piraino
Journal:  Mar Policy       Date:  2017

2.  Uncovering the intricacies of microbial community dynamics at Helgoland Roads at the end of a spring bloom using automated sampling and 18S meta-barcoding.

Authors:  Katja Metfies; Johanna Hessel; Robin Klenk; Wilhelm Petersen; Karen Helen Wiltshire; Alexandra Kraberg
Journal:  PLoS One       Date:  2020-06-22       Impact factor: 3.240

3.  Metatranscriptomic Analysis of Oil-Exposed Seawater Bacterial Communities Archived by an Environmental Sample Processor (ESP).

Authors:  Kamila Knapik; Andrea Bagi; Adriana Krolicka; Thierry Baussant
Journal:  Microorganisms       Date:  2020-05-15

Review 4.  Approaches to Unmask Functioning of the Uncultured Microbial Majority From Extreme Habitats on the Seafloor.

Authors:  Stefanie Böhnke; Mirjam Perner
Journal:  Front Microbiol       Date:  2022-03-29       Impact factor: 5.640

5.  Sea lice (Lepeophtherius salmonis) detection and quantification around aquaculture installations using environmental DNA.

Authors:  Adriana Krolicka; Mari Mæland Nilsen; Brian Klitgaard Hansen; Magnus Wulf Jacobsen; Fiona Provan; Thierry Baussant
Journal:  PLoS One       Date:  2022-09-21       Impact factor: 3.752

6.  Implementing Morpholino-Based Nucleic Acid Sensing on a Portable Surface Plasmon Resonance Instrument for Future Application in Environmental Monitoring.

Authors:  Andrea Bagi; Scott D Soelberg; Clement E Furlong; Thierry Baussant
Journal:  Sensors (Basel)       Date:  2018-09-28       Impact factor: 3.576

  6 in total

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