Literature DB >> 27060770

RAN translation-What makes it run?

Katelyn M Green1, Alexander E Linsalata1, Peter K Todd2.   

Abstract

Nucleotide-repeat expansions underlie a heterogeneous group of neurodegenerative and neuromuscular disorders for which there are currently no effective therapies. Recently, it was discovered that such repetitive RNA motifs can support translation initiation in the absence of an AUG start codon across a wide variety of sequence contexts, and that the products of these atypical translation initiation events contribute to neuronal toxicity. This review examines what we currently know and do not know about repeat associated non-AUG (RAN) translation in the context of established canonical and non-canonical mechanisms of translation initiation. We highlight recent findings related to RAN translation in three repeat expansion disorders: CGG repeats in fragile X-associated tremor ataxia syndrome (FXTAS), GGGGCC repeats in C9orf72 associated amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD) and CAG repeats in Huntington disease. These studies suggest that mechanistic differences may exist for RAN translation dependent on repeat type, repeat reading frame, and the surrounding sequence context, but that for at least some repeats, RAN translation retains a dependence on some of the canonical translational initiation machinery. This article is part of a Special Issue entitled SI:RNA Metabolism in Disease. Published by Elsevier B.V.

Entities:  

Keywords:  Amyotrophic lateral sclerosis; C9orf72; Fragile X-associated tremor ataxia syndrome; Frontotemporal dementia; Huntington disease; Translation initiation

Mesh:

Substances:

Year:  2016        PMID: 27060770      PMCID: PMC5003667          DOI: 10.1016/j.brainres.2016.04.003

Source DB:  PubMed          Journal:  Brain Res        ISSN: 0006-8993            Impact factor:   3.252


  149 in total

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3.  The overlap of amyotrophic lateral sclerosis and frontotemporal dementia.

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Journal:  Neurology       Date:  2002-10-08       Impact factor: 9.910

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Journal:  J Biol Chem       Date:  1983-05-10       Impact factor: 5.157

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Journal:  Science       Date:  2009-02-12       Impact factor: 47.728

6.  American College of Medical Genetics and Genomics Standards and Guidelines for Clinical Genetics Laboratories, 2014 edition: technical standards and guidelines for Huntington disease.

Authors:  Lora Bean; Pinar Bayrak-Toydemir
Journal:  Genet Med       Date:  2014-10-30       Impact factor: 8.822

7.  Initiation of translation by cricket paralysis virus IRES requires its translocation in the ribosome.

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Journal:  Cell       Date:  2014-05-01       Impact factor: 41.582

8.  FMRpolyG-positive inclusions in CNS and non-CNS organs of a fragile X premutation carrier with fragile X-associated tremor/ataxia syndrome.

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9.  Quantitative profiling of initiating ribosomes in vivo.

Authors:  Xiangwei Gao; Ji Wan; Botao Liu; Ming Ma; Ben Shen; Shu-Bing Qian
Journal:  Nat Methods       Date:  2014-12-08       Impact factor: 28.547

Review 10.  RAN translation and frameshifting as translational challenges at simple repeats of human neurodegenerative disorders.

Authors:  Marzena Wojciechowska; Marta Olejniczak; Paulina Galka-Marciniak; Magdalena Jazurek; Wlodzimierz J Krzyzosiak
Journal:  Nucleic Acids Res       Date:  2014-09-12       Impact factor: 16.971

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  46 in total

Review 1.  New pathologic mechanisms in nucleotide repeat expansion disorders.

Authors:  C M Rodriguez; P K Todd
Journal:  Neurobiol Dis       Date:  2019-06-21       Impact factor: 5.996

2.  Repeat-associated non-ATG (RAN) translation.

Authors:  John Douglas Cleary; Amrutha Pattamatta; Laura P W Ranum
Journal:  J Biol Chem       Date:  2018-09-13       Impact factor: 5.157

Review 3.  [Fragile X associated tremor/ataxia syndrome: its clinical presentation, pathology, and treatment].

Authors:  M J Salcedo-Arellano; R J Hagerman; V Martinez-Cerdeno
Journal:  Rev Neurol       Date:  2019-03-01       Impact factor: 0.870

Review 4.  Models and mechanisms of repeat expansion disorders: a worm's eye view.

Authors:  Paige Rudich; Todd Lamitina
Journal:  J Genet       Date:  2018-07       Impact factor: 1.166

Review 5.  Beyond the Triplet Code: Context Cues Transform Translation.

Authors:  Gloria A Brar
Journal:  Cell       Date:  2016-12-15       Impact factor: 41.582

6.  c9orf72 Disease-Related Foci Are Each Composed of One Mutant Expanded Repeat RNA.

Authors:  Jing Liu; Jiaxin Hu; Andrew T Ludlow; Jacqueline T Pham; Jerry W Shay; Jeffrey D Rothstein; David R Corey
Journal:  Cell Chem Biol       Date:  2017-01-26       Impact factor: 8.116

Review 7.  The Integrated Stress Response and Phosphorylated Eukaryotic Initiation Factor 2α in Neurodegeneration.

Authors:  Sarah Bond; Claudia Lopez-Lloreda; Patrick J Gannon; Cagla Akay-Espinoza; Kelly L Jordan-Sciutto
Journal:  J Neuropathol Exp Neurol       Date:  2020-02-01       Impact factor: 3.685

8.  A comprehensive catalog of predicted functional upstream open reading frames in humans.

Authors:  Patrick McGillivray; Russell Ault; Mayur Pawashe; Robert Kitchen; Suganthi Balasubramanian; Mark Gerstein
Journal:  Nucleic Acids Res       Date:  2018-04-20       Impact factor: 16.971

9.  Differential toxicity of ataxin-3 isoforms in Drosophila models of Spinocerebellar Ataxia Type 3.

Authors:  Sean L Johnson; Jessica R Blount; Kozeta Libohova; Bedri Ranxhi; Henry L Paulson; Wei-Ling Tsou; Sokol V Todi
Journal:  Neurobiol Dis       Date:  2019-07-13       Impact factor: 5.996

Review 10.  Encoding activities of non-coding RNAs.

Authors:  Yanan Pang; Chuanbin Mao; Shanrong Liu
Journal:  Theranostics       Date:  2018-03-28       Impact factor: 11.556

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