Literature DB >> 27058642

Dynamic quantification of avian influenza H7N9(A) virus in a human infection during clinical treatment using droplet digital PCR.

Yong Yan1, Xiao-Jun Jia2, Heng-Hui Wang1, Xiao-Fei Fu3, Ji-Mei Ji1, Pei-Yan He1, Li-Xia Chen1, Jian-Yong Luo1, Zhong-Wen Chen4.   

Abstract

This study involved a human infection with avian influenza H7N9(A) virus in Zhejiang province, the first one after implementing the closure measures of living poultry markets in China. The clinical symptoms, epidemiological and virological characteristics of the case were described briefly, and as the emphasis, H7N9 virus was detected quantitatively and continuously from the collected samples in 10 different periods of the patient's treatment in order to reveal changes of viral load in patient's body during the treatment. This study first used reverse-transcription droplet digital PCR (RT-ddPCR) assays to monitor viral load dynamically for human H7N9 infection, synchronously performing real-time RT-PCR as a reference technology to obtain more comprehensive data for comparison. Our results indicated that RT-ddPCR compared to real-time RT-PCR is more sensitive and accurate for quantifying H7N9 viral load without the use of standard curves. Furthermore it can provide reference data for clinical policies including infectivity judgement, ward transferring and therapy adjustment for the patient during treatment.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Absolute quantification; Avian influenza; Droplet digital PCR; H7N9; Real-time PCR; Viral load

Mesh:

Year:  2016        PMID: 27058642     DOI: 10.1016/j.jviromet.2016.04.001

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  4 in total

1.  Droplet digital PCR: A novel method for detection of influenza virus defective interfering particles.

Authors:  Samantha L Schwartz; Anice C Lowen
Journal:  J Virol Methods       Date:  2016-08-31       Impact factor: 2.014

Review 2.  Biotic concerns in generating molecular diagnosis matrixes for 4 avian viruses with emphasis on Marek's disease virus.

Authors:  Irit Davidson
Journal:  J Virol Methods       Date:  2019-07-24       Impact factor: 2.014

Review 3.  Droplet digital PCR of viral ‎DNA/RNA, current progress, challenges, and future perspectives.

Authors:  Amir Asri Kojabad; Mahdieh Farzanehpour; Hadi Esmaeili Gouvarchin Galeh; Ruhollah Dorostkar; Ali Jafarpour; Masoumeh Bolandian; Majid Mirzaei Nodooshan
Journal:  J Med Virol       Date:  2021-03-11       Impact factor: 20.693

4.  Metagenomic Nanopore Sequencing of Influenza Virus Direct from Clinical Respiratory Samples.

Authors:  Kuiama Lewandowski; Yifei Xu; Steven T Pullan; Sheila F Lumley; Dona Foster; Nicholas Sanderson; Alison Vaughan; Marcus Morgan; Nicole Bright; James Kavanagh; Richard Vipond; Miles Carroll; Anthony C Marriott; Karen E Gooch; Monique Andersson; Katie Jeffery; Timothy E A Peto; Derrick W Crook; A Sarah Walker; Philippa C Matthews
Journal:  J Clin Microbiol       Date:  2019-12-23       Impact factor: 5.948

  4 in total

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