Literature DB >> 27053555

Commandeering the Ribosome: Lessons Learned from Dicistroviruses about Translation.

Craig H Kerr1, Eric Jan2.   

Abstract

To replicate, all viruses depend entirely on the enslavement of host cell ribosomes for their own advantage. To this end, viruses have evolved a multitude of translational strategies to usurp the ribosome. RNA-based structures known as internal ribosome entry sites (IRESs) are among the most notable mechanisms employed by viruses to seize host ribosomes. In this article, we spotlight the intergenic region IRES from the Dicistroviridae family of viruses and its importance as a model for IRES-dependent translation and in understanding fundamental properties of translation.
Copyright © 2016, American Society for Microbiology. All Rights Reserved.

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Year:  2016        PMID: 27053555      PMCID: PMC4886786          DOI: 10.1128/JVI.00737-15

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  20 in total

1.  tRNA-mRNA mimicry drives translation initiation from a viral IRES.

Authors:  David A Costantino; Jennifer S Pfingsten; Robert P Rambo; Jeffrey S Kieft
Journal:  Nat Struct Mol Biol       Date:  2007-12-23       Impact factor: 15.369

2.  Naturally occurring dicistronic cricket paralysis virus RNA is regulated by two internal ribosome entry sites.

Authors:  J E Wilson; M J Powell; S E Hoover; P Sarnow
Journal:  Mol Cell Biol       Date:  2000-07       Impact factor: 4.272

3.  rRNA pseudouridylation defects affect ribosomal ligand binding and translational fidelity from yeast to human cells.

Authors:  Karen Jack; Cristian Bellodi; Dori M Landry; Rachel O Niederer; Arturas Meskauskas; Sharmishtha Musalgaonkar; Noam Kopmar; Olya Krasnykh; Alison M Dean; Sunnie R Thompson; Davide Ruggero; Jonathan D Dinman
Journal:  Mol Cell       Date:  2011-11-18       Impact factor: 17.970

4.  RPS25 is essential for translation initiation by the Dicistroviridae and hepatitis C viral IRESs.

Authors:  Dori M Landry; Marla I Hertz; Sunnie R Thompson
Journal:  Genes Dev       Date:  2009-12-01       Impact factor: 11.361

Review 5.  Non-canonical translation in RNA viruses.

Authors:  Andrew E Firth; Ian Brierley
Journal:  J Gen Virol       Date:  2012-04-25       Impact factor: 3.891

6.  Initiation of translation by cricket paralysis virus IRES requires its translocation in the ribosome.

Authors:  Israel S Fernández; Xiao-Chen Bai; Garib Murshudov; Sjors H W Scheres; V Ramakrishnan
Journal:  Cell       Date:  2014-05-01       Impact factor: 41.582

7.  Initiation of translation in bacteria by a structured eukaryotic IRES RNA.

Authors:  Timothy M Colussi; David A Costantino; Jianyu Zhu; John Paul Donohue; Andrei A Korostelev; Zane A Jaafar; Terra-Dawn M Plank; Harry F Noller; Jeffrey S Kieft
Journal:  Nature       Date:  2015-02-04       Impact factor: 49.962

8.  Attachment of ribosomal complexes and retrograde scanning during initiation on the Halastavi árva virus IRES.

Authors:  Irina S Abaeva; Tatyana V Pestova; Christopher U T Hellen
Journal:  Nucleic Acids Res       Date:  2016-01-17       Impact factor: 16.971

9.  A dynamic RNA loop in an IRES affects multiple steps of elongation factor-mediated translation initiation.

Authors:  Marisa D Ruehle; Haibo Zhang; Ryan M Sheridan; Somdeb Mitra; Yuanwei Chen; Ruben L Gonzalez; Barry S Cooperman; Jeffrey S Kieft
Journal:  Elife       Date:  2015-11-02       Impact factor: 8.140

10.  Temporal Regulation of Distinct Internal Ribosome Entry Sites of the Dicistroviridae Cricket Paralysis Virus.

Authors:  Anthony Khong; Jennifer M Bonderoff; Ruth V Spriggs; Erik Tammpere; Craig H Kerr; Thomas J Jackson; Anne E Willis; Eric Jan
Journal:  Viruses       Date:  2016-01-19       Impact factor: 5.048

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  5 in total

Review 1.  tRNA-mimicry in IRES-mediated translation and recoding.

Authors:  Samuel E Butcher; Eric Jan
Journal:  RNA Biol       Date:  2016-08-11       Impact factor: 4.652

2.  Transmission of Cricket paralysis virus via exosome-like vesicles during infection of Drosophila cells.

Authors:  Craig H Kerr; Udit Dalwadi; Nichollas E Scott; Calvin K Yip; Leonard J Foster; Eric Jan
Journal:  Sci Rep       Date:  2018-11-26       Impact factor: 4.379

Review 3.  Viral RNA structure-based strategies to manipulate translation.

Authors:  Zane A Jaafar; Jeffrey S Kieft
Journal:  Nat Rev Microbiol       Date:  2019-01       Impact factor: 60.633

4.  The Israeli acute paralysis virus IRES captures host ribosomes by mimicking a ribosomal state with hybrid tRNAs.

Authors:  Francisco Acosta-Reyes; Ritam Neupane; Joachim Frank; Israel S Fernández
Journal:  EMBO J       Date:  2019-10-14       Impact factor: 11.598

5.  Mapping of sequences in the 5' region and 3' UTR of tomato ringspot virus RNA2 that facilitate cap-independent translation of reporter transcripts in vitro.

Authors:  Dinesh Babu Paudel; Hélène Sanfaçon
Journal:  PLoS One       Date:  2021-04-09       Impact factor: 3.240

  5 in total

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