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Literature DB >> 27052733

Genome analysis of an atypical bovine pestivirus from fetal bovine serum.

Shandian Gao¹, Junzheng Du¹, Zhancheng Tian¹, Shanshan Xing¹, Huiyun Chang¹, Guangyuan Liu¹, Jianxun Luo¹, Hong Yin^2,3.

Abstract

We report the complete genome sequence of a bovine pestivirus LVRI/cont-1 originated from a commercial batch of fetal bovine serum. Its complete genome consists of 12,282 nucleotides (nt), which contain an open reading frame (ORF) of 11,700 bp flanked by 5' and 3' untranslated regions (383 and 199 bp). The size of the 5'UTR and the individual protein coding region of LVRI/cont-1 are identical to those of the reference virus Th/04_KhonKaen, but it has a deletion of the first 56 nt in the 3'UTR. Alignment of the complete nucleotide sequence and phylogenetic analysis indicate that this viral isolate belongs to atypical pestiviruses.

Entities: Species

Keywords: Atypical bovine pestivirus; Genome; Phylogeny

Mesh：

Substances：

Year: 2016 PMID： 27052733 DOI： 10.1007/s11262-016-1321-2

Source DB: PubMed Journal: Virus Genes ISSN： 0920-8569 Impact factor: 2.332

15 in total

1. Evaluation of vaccines, interferons and cell substrates for pestivirus contamination.

Authors: S A Audet; R L Crim; J Beeler
Journal: Biologicals Date: 2000-03 Impact factor: 1.856

2. Genetic and antigenic characterization of an atypical pestivirus isolate, a putative member of a novel pestivirus species.

Authors: Horst Schirrmeier; Günther Strebelow; Klaus Depner; Bernd Hoffmann; Martin Beer
Journal: J Gen Virol Date: 2004-12 Impact factor: 3.891

3. Persistent infection caused by Hobi-like pestivirus.

Authors: Nicola Decaro; Michele Losurdo; Maria Stella Lucente; Rossana Sciarretta; Viviana Mari; Vittorio Larocca; Gabriella Elia; Nicola Cavaliere; Vito Martella; Antonio Fasanella; Canio Buonavoglia
Journal: J Clin Microbiol Date: 2013-01-16 Impact factor: 5.948

4. Methods to select suitable fetal bovine serum for use in quality control assays for the detection of adventitious viruses from biological products.

Authors: Takashi Kozasa; Hiroshi Aoki; Nao Nakajima; Akio Fukusho; Masatoshi Ishimaru; Shigeyuki Nakamura
Journal: Biologicals Date: 2011-06-30 Impact factor: 1.856

1. Genetic Diversity of Bovine Pestiviruses Detected in Backyard Cattle Farms Between 2014 and 2019 in Henan Province, China.

Authors: Hongfei Shi; Huan Li; Yang Zhang; Lulu Yang; Yun Hu; Zhicheng Wang; Lisha Duan; Chaoliang Leng; Baolong Yan; Lunguang Yao
Journal: Front Vet Sci Date: 2020-04-17

1 in total

Genome analysis of an atypical bovine pestivirus from fetal bovine serum.

1. Evaluation of vaccines, interferons and cell substrates for pestivirus contamination.

2. Genetic and antigenic characterization of an atypical pestivirus isolate, a putative member of a novel pestivirus species.

3. Persistent infection caused by Hobi-like pestivirus.

4. Methods to select suitable fetal bovine serum for use in quality control assays for the detection of adventitious viruses from biological products.

5. Detection and characterization of pestivirus contaminations in human live viral vaccines.

6. Demonstration and genotyping of pestivirus RNA from mammalian cell lines.

7. Virus recovery and full-length sequence analysis of atypical bovine pestivirus Th/04_KhonKaen.

8. Phylogeny, classification and evolutionary insights into pestiviruses.

9. Atypical pestivirus and severe respiratory disease in calves, Europe.

10. Detection and identification of the atypical bovine pestiviruses in commercial foetal bovine serum batches.

1. Genetic Diversity of Bovine Pestiviruses Detected in Backyard Cattle Farms Between 2014 and 2019 in Henan Province, China.