| Literature DB >> 27050816 |
Alexander Richard Braczkowski1, Guy Andrew Balme2,3, Amy Dickman1,4, Julien Fattebert2,5, Paul Johnson1, Tristan Dickerson2, David Whyte Macdonald1, Luke Hunter2.
Abstract
Density estimates for large carnivores derived from camera surveys often have wide confidence intervals due to low detection rates. Such estimates are of limited value to authorities, which require precise population estimates to inform conservation strategies. Using lures can potentially increase detection, improving the precision of estimates. However, by altering the spatio-temporal patterning of individuals across the camera array, lures may violate closure, a fundamental assumption of capture-recapture. Here, we test the effect of scent lures on the precision and veracity of density estimates derived from camera-trap surveys of a protected African leopard population. We undertook two surveys (a 'control' and 'treatment' survey) on Phinda Game Reserve, South Africa. Survey design remained consistent except a scent lure was applied at camera-trap stations during the treatment survey. Lures did not affect the maximum movement distances (p = 0.96) or temporal activity of female (p = 0.12) or male leopards (p = 0.79), and the assumption of geographic closure was met for both surveys (p >0.05). The numbers of photographic captures were also similar for control and treatment surveys (p = 0.90). Accordingly, density estimates were comparable between surveys (although estimates derived using non-spatial methods (7.28-9.28 leopards/100km2) were considerably higher than estimates from spatially-explicit methods (3.40-3.65 leopards/100km2). The precision of estimates from the control and treatment surveys, were also comparable and this applied to both non-spatial and spatial methods of estimation. Our findings suggest that at least in the context of leopard research in productive habitats, the use of lures is not warranted.Entities:
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Year: 2016 PMID: 27050816 PMCID: PMC4822812 DOI: 10.1371/journal.pone.0151033
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1The location of the Phinda Private Game Reserve with camera-trap stations and potential leopard home-range centres (green).
Patches of unsuitable leopard habitat are demarcated in white. Camera-traps were set on roads and trails to increase capture probability of leopards.
Models used in secr analysis to estimate leopard density on Phinda.
| Variable | Description | Variable function |
|---|---|---|
| g0~1 | Constant | g0 and sigma kept constant |
| g0~b | Learned response | Step change in parameter after initial detection of animal |
| g0~h2 | 2-class mixture | Finite mixture model with two latent classes |
| g0~bk | Animal x site response | Site-specific step change |
| g0~Bk | Animal x site response | Site-specific transient response |
| g0~Sex* | Sex of animal | Male and female specific detection |
Model definitions and selection criteria for density models fitted for the control and lure surveys in secr.
| Survey | Model definition | Parameters | Log likelihood | AIC | AICc | Delta AIC | AIC weight | Evidence ratio |
|---|---|---|---|---|---|---|---|---|
| g0~bk | 4 | -213.34 | 434.67 | 438.67 | 0 | 0.97 | 1 | |
| g0~1 | 3 | -219.14 | 444.29 | 446.47 | 7.78 | 0.02 | 48.5 | |
| g0~b | 4 | -218.21 | 444.42 | 448.42 | 9.75 | 0.01 | 97 | |
| Control | g0~sex | 4 | -218.59 | 445.18 | 449.18 | 10.5 | 0 | - |
| g0~h2 | 4 | -218.59 | 445.18 | 449.18 | 10.5 | 0 | - | |
| g0~Bk | 4 | -218.66 | 445.32 | 449.32 | 10.65 | 0 | - | |
| g0~sex, sigma~sex | 5 | -217.47 | 444.94 | 444.94 | 12.93 | 0 | - | |
| g0~sex, sigma~sex | 5 | -199.69 | 409.38 | 416.88 | 0 | 0.31 | 1 | |
| g0~bk | 4 | -202.27 | 412.54 | 416.98 | 0.1 | 0.3 | 1.03 | |
| g0~1 | 3 | -205.21 | 416.42 | 418.82 | 1.94 | 0.12 | 2.58 | |
| Lure | g0~sex | 4 | -203.31 | 414.62 | 419.07 | 2.18 | 0.11 | 2.82 |
| g0~h2 | 4 | -203.31 | 414.62 | 419.07 | 2.18 | 0.11 | 2.82 | |
| g0~Bk | 4 | -204.56 | 417.13 | 421.57 | 4.69 | 0.03 | 10.33 | |
| g0~b | 4 | -205.2 | 418.4 | 422.85 | 5.96 | 0.02 | 15.5 |
Geweke diagnostic statistics and Bayes p-values generated from the four models run for the control and treatment surveys in SPACECAP.
| Model | iterations | Burn in |
|---|---|---|
| Control survey trap absent | 100 000 | 50 000 |
| Control survey trap present | 80 000 | 40 000 |
| Treatment survey trap absent | 80 000 | 30 000 |
| Treatment survey trap present | 80 000 | 40 000 |
Shrink reduction factors generated using the Rubin-Gelman diagnostic in R.
| Model | sigma | lam0 | beta | psi | N | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| Point est | Upper C.I | Point est | Upper C.I | Point est | Upper C.I | Point est | Upper C.I | Point est | Upper C.I | |
| Control survey trap absent | 1.02 | 1.02 | 1.01 | 1.01 | - | - | 1 | 1 | 1 | 1 |
| Control survey trap present | 1.09 | 1.07 | 1.02 | 1.02 | 1.07 | 1.06 | 1.02 | 1.01 | 1.02 | 1.01 |
| Treatment survey trap absent | 1.01 | 1.01 | 1 | 1 | - | - | 1.01 | 1.01 | 1.01 | 1.01 |
| Treatment survey trap present | 1 | 1 | 1.07 | 1.05 | 1.16 | 1.12 | 1.01 | 1 | 1.01 | 1 |
Geweke diagnostic statistics and Bayes p-values generated from the four models run for the control and treatment surveys in SPACECAP.
| Model | sigma | lam0 | beta* | psi | N | Bayes p-value |
|---|---|---|---|---|---|---|
| Control survey trap absent | 0.16 | -1.15 | - | -0.11 | -0.11 | 0.53 |
| Control survey trap present | -0.80 | 0.42 | -0.25 | 1.01 | 1.09 | 0.53 |
| Treatment survey trap absent | 0.66 | -0.36 | - | -1.37 | -1.17 | 0.59 |
| Treatment survey trap present | 0.26 | 0.31 | 0.81 | 0.37 | -1.07 | 0.57 |