Literature DB >> 27050258

Cloning, expression, purification and crystallization of Schizosaccharomyces pombe Set7, a putative histone methyltransferase.

Damiaan E H F Mevius1, Yunpeng Shen1, Masayo Morishita1, Eric di Luccio1.   

Abstract

Dysfunction of histone-modifying enzymes affects chromatin regulation and is involved in carcinogenesis, tumour progression and other diseases. Histone methyltransferases are a family of key histone-modifying enzymes, but their structures, functions and mechanisms are incompletely understood, thus constraining drug-design efforts. Here, preliminary steps towards structure-function studies of Schizosaccharomyces pombe Set7, a putative histone methyltransferase and the first yeast full-length SET-domain-containing protein to be studied using X-ray crystallography, are reported. The methods from cloning to X-ray diffraction and phasing are discussed and the results will aid in prospective studies of histone-modifying enzymes.

Entities:  

Keywords:  Schizosaccharomyces pombe; Set7; X-ray crystallography; histone methyltransferase; histone modifications

Mesh:

Substances:

Year:  2016        PMID: 27050258      PMCID: PMC4822981          DOI: 10.1107/S2053230X16003794

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  21 in total

1.  Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly.

Authors:  J Nakayama ; J C Rice; B D Strahl; C D Allis; S I Grewal
Journal:  Science       Date:  2001-03-15       Impact factor: 47.728

2.  The language of covalent histone modifications.

Authors:  B D Strahl; C D Allis
Journal:  Nature       Date:  2000-01-06       Impact factor: 49.962

Review 3.  Histone lysine methylation and demethylation pathways in cancer.

Authors:  Radhika A Varier; H T Marc Timmers
Journal:  Biochim Biophys Acta       Date:  2010-10-15

Review 4.  SET for life: biochemical activities and biological functions of SET domain-containing proteins.

Authors:  Hans-Martin Herz; Alexander Garruss; Ali Shilatifard
Journal:  Trends Biochem Sci       Date:  2013-10-20       Impact factor: 13.807

5.  Histone H3 K36 methylation is associated with transcription elongation in Schizosaccharomyces pombe.

Authors:  Stephanie A Morris; Yoichiro Shibata; Ken-ichi Noma; Yuko Tsukamoto; Erin Warren; Brenda Temple; Shiv I S Grewal; Brian D Strahl
Journal:  Eukaryot Cell       Date:  2005-08

6.  Dynamic regulation of the PR-Set7 histone methyltransferase is required for normal cell cycle progression.

Authors:  Shumin Wu; Weiping Wang; Xiangduo Kong; Lauren M Congdon; Kyoko Yokomori; Marc W Kirschner; Judd C Rice
Journal:  Genes Dev       Date:  2010-10-21       Impact factor: 11.361

7.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

8.  A conserved SET domain methyltransferase, Set11, modifies ribosomal protein Rpl12 in fission yeast.

Authors:  Mahito Sadaie; Kaori Shinmyozu; Jun-ichi Nakayama
Journal:  J Biol Chem       Date:  2008-01-14       Impact factor: 5.157

9.  Exploiting structure similarity in refinement: automated NCS and target-structure restraints in BUSTER.

Authors:  Oliver S Smart; Thomas O Womack; Claus Flensburg; Peter Keller; Włodek Paciorek; Andrew Sharff; Clemens Vonrhein; Gérard Bricogne
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-03-16

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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