Literature DB >> 27050257

Crystal structure of histone-like protein from Streptococcus mutans refined to 1.9 Å resolution.

Pierce O'Neil1, Scott Lovell2, Nurjahan Mehzabeen2, Kevin Battaile3, Indranil Biswas1.   

Abstract

Nucleoid-associated proteins (NAPs) in prokaryotes play an important architectural role in DNA bending, supercoiling and DNA compaction. In addition to architectural roles, some NAPs also play regulatory roles in DNA replication and repair, and act as global transcriptional regulators in many bacteria. Bacteria encode multiple NAPs and some of them are even essential for survival. Streptococcus mutans, a dental pathogen, encodes one such essential NAP called histone-like protein (HLP). Here, the three-dimensional structure of S. mutans HLP has been determined to 1.9 Å resolution. The HLP structure is a dimer and shares a high degree of similarity with other bacterial NAPs, including HU. Since HLPs are essential for the survival of pathogenic streptococci, this structure determination is potentially beneficial for future drug development against these pathogens.

Entities:  

Keywords:  HLP; Streptococcus mutans; histone-like protein; nucleoid-associated protein

Mesh:

Substances:

Year:  2016        PMID: 27050257      PMCID: PMC4822980          DOI: 10.1107/S2053230X1600217X

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  49 in total

1.  The histone-like protein HU binds specifically to DNA recombination and repair intermediates.

Authors:  D Kamashev; J Rouviere-Yaniv
Journal:  EMBO J       Date:  2000-12-01       Impact factor: 11.598

2.  ElNemo: a normal mode web server for protein movement analysis and the generation of templates for molecular replacement.

Authors:  Karsten Suhre; Yves-Henri Sanejouand
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

Review 3.  Histonelike proteins of bacteria.

Authors:  K Drlica; J Rouviere-Yaniv
Journal:  Microbiol Rev       Date:  1987-09

4.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

5.  The essentiality and involvement of Streptococcus intermedius histone-like DNA-binding protein in bacterial viability and normal growth.

Authors:  Dali Liu; Hiromichi Yumoto; Keiji Murakami; Katsuhiko Hirota; Tsuneko Ono; Hideaki Nagamune; Shizuo Kayama; Takashi Matsuo; Yoichiro Miyake
Journal:  Mol Microbiol       Date:  2008-04-11       Impact factor: 3.501

Review 6.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

7.  How good are my data and what is the resolution?

Authors:  Philip R Evans; Garib N Murshudov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-06-13

8.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

9.  The HU regulon is composed of genes responding to anaerobiosis, acid stress, high osmolarity and SOS induction.

Authors:  Jacques Oberto; Sabrina Nabti; Valérie Jooste; Hervé Mignot; Josette Rouviere-Yaniv
Journal:  PLoS One       Date:  2009-02-04       Impact factor: 3.240

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  3 in total

1.  The structural basis of African swine fever virus pA104R binding to DNA and its inhibition by stilbene derivatives.

Authors:  Ruili Liu; Yeping Sun; Yan Chai; Su Li; Shihua Li; Liang Wang; Jiaqi Su; Shaoxiong Yu; Jinghua Yan; Feng Gao; Gaiping Zhang; Hua-Ji Qiu; George F Gao; Jianxun Qi; Han Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-01       Impact factor: 11.205

2.  Disruption of the M949_RS01915 gene changed the bacterial lipopolysaccharide pattern, pathogenicity and gene expression of Riemerella anatipestifer.

Authors:  Yafeng Dou; Xiaolan Wang; Guijing Yu; Shaohui Wang; Mingxing Tian; Jingjing Qi; Tao Li; Chan Ding; Shengqing Yu
Journal:  Vet Res       Date:  2017-02-06       Impact factor: 3.683

3.  HU of Streptococcus pneumoniae Is Essential for the Preservation of DNA Supercoiling.

Authors:  María-José Ferrándiz; David Carreño; Silvia Ayora; Adela G de la Campa
Journal:  Front Microbiol       Date:  2018-03-19       Impact factor: 5.640

  3 in total

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