| Literature DB >> 27049756 |
Mark Rademaker1,2,3, Erik Meijaard3,4, Gono Semiadi3,5, Simen Blokland1,2, Eric W Neilson6, Eva Johanna Rode-Margono3,7.
Abstract
The Bawean warty pig (Sus blouchi) is an endemic pig species confined to the 192 km(2) large island of Bawean in the Java Sea, Indonesia. Due to a lack of quantitative ecological research, understanding of natural history and conservation requirements have so far been based solely on anecdotal information from interviews with local people and study of captive and museum specimens. In this study we provide the first assessment of population and habitat preferences for S. blouchi by using camera trapping. From the 4th of November 2014 to January 8th 2015, we placed camera traps at 100 locations in the forested protected areas on Bawean. In 690.31 camera days (16567.45 hours) we captured 92 independent videos showing S. blouchi. Variation in S. blouchi trapping rates with cumulative trap effort stabilized after 500 camera days. An important outcome is that, in contrast to the suggestion of previous assessments, only S. blouchi was detected and no S. scrofa was found, which excludes hybridization threats. We fitted a Random Encounter Model, which does not require the identification of individual animals, to our camera-trapping data and estimated 172-377 individuals to be present on the island. Activity patterns and habitat data indicate that S. blouchi is mainly nocturnal and prefers community forests and areas near forest borders. Next to this, we found a positive relationship between S. blouchi occupancy, distance to nearest border, litter depth and tree density in the highest ranking occupancy models. Although these relationships proved non-significant based on model averaging, their presence in the top ranking models suggests that these covariables do play a role in predicting S. blouchi occurrence on Bawean. The estimated amount of sites occupied reached 58%. Based on our results, especially the estimation of the population size and area of occupancy, we determine that the species is Endangered according to the IUCN/SSC Red List criteria.Entities:
Mesh:
Year: 2016 PMID: 27049756 PMCID: PMC4822801 DOI: 10.1371/journal.pone.0151732
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1(A) Zonation of protected areas on Bawean Island, camera trap locations and the location of the research station. (B) Location of Bawean in the Java Sea. A buffer of 100 meter from the outer forest edge was included into the ArcGIS base map due to the uncertainty of the official zonation (see text).
Distinct habitat types found at the study site.
Adapted from Nijman [17].
| Habitat type | Description |
|---|---|
| Community owned forested gardens at the assumed borders of the protected areas consisting of a mixture of cultivated trees such as | |
| Monoculture | |
| Patches inside the protected areas characterized by high, young (DBH<30cm) tree density and clear signs of logging and burning. Undergrowth is either dominated by a mix of grassland and herbaceous plants, or dense shrub cover. Tree species primarily represent those found in community forest, such as mixtures of | |
| Mature secondary or tertiary forest characterized by |
Fig 2Camera trapping sampling precision for S. blouchi.
Sampling precision was expressed as CV of S. blouchi camera trap rate with cumulative sampling effort (number of camera trap days) in the protected areas.
Fig 3Proportion of observations per time of day spent active fitted with a line function using the activity package in R [33] to determine proportion of time spent active.
Vertical lines indicate sunrise and sunset at approximately 05.30 and 17.50 year-round.
Parameter estimates for S. blouchi included in the REM.
| Parameter estimates | Mean | S.E. | N. videos |
|---|---|---|---|
| Trap rate ( | 0.1374 | 0.0338 | 92 |
| Day range ( | 9.7802 | 3.7170 | 57 |
| Radial distance ( | 0.0039 | 0.0003 | 63 |
| Angle (radians, θ) | 0.3920 | 0.0330 | 62 |
| Group size ( | 2.18 | 57 |
Top 13 AICc models competing for first ranking model.
Beta coefficients ± standard errors for each covariate are listed. The presence of categorical variables Habitat type and Area in the models is indicated with the • symbol.
| Model ID | Habitat type | Tree density | Altititude | Dist. to near. border | Litter depth | Area | No. of param-eters | AICc | Delta AICc | Akaike weight |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | • | 0.676 ± 0.459 | -0.842 ± 0.405 | 7 | 241.1 | 0.0 | 0.0875 | |||
| 2 | 0.641 ± 0.421 | -1.130 ± 0.358 | 3 | 241.2 | 0.1 | 0.0835 | ||||
| 3 | • | 0.652 ± 0.468 | 0.188 ± 0.795 | -0.837 ± 0.423 | 8 | 241.5 | 0.4 | 0.0726 | ||
| 4 | • | 0.597 ± 0.466 | -0.835 ± 0.421 | • | 10 | 241.8 | 0.6 | 0.0640 | ||
| 5 | • | 0.848 ± 0.484 | -0.836 ± 0.406 | -1.124 ± 0.905 | 8 | 241.9 | 0.7 | 0.0604 | ||
| 6 | 0.606 ± 0.439 | -0.461 ± 0.827 | -0.997 ± 0.386 | • | 7 | 241.9 | 0.8 | 0.0572 | ||
| 7 | 0.547 ± 0.428 | -1.106 ± 0.363 | • | 6 | 242.0 | 0.9 | 0.0560 | |||
| 8 | 0.787 ± 0.462 | -1.118 ± 0.364 | -1.220 ± 0.838 | • | 7 | 242.1 | 1.0 | 0.0522 | ||
| 9 | • | 0.803 ± 0.488 | -0.456 ± 0.834 | -0.878 ± 0.426 | 9 | 242.2 | 1.1 | 0.0504 | ||
| 10 | • | 0.620 ± 0.473 | -0.238 ± 0.845 | -0.762 ± 0.443 | • | 11 | 242.2 | 1.1 | 0.0503 | |
| 11 | 0.787 ± 0.465 | -0.103 ± 0.880 | -1.073 ± 0.394 | -1.150 ± 0.898 | • | 8 | 242.6 | 1.5 | 0.0403 | |
| 12 | -0.168 ± 0.805 | -0.894 ± 0.375 | • | 6 | 242.8 | 1.7 | 0.0365 | |||
| 13 | • | 0.756 ± 0.492 | -0.840 ± 0.422 | -1.009 ± 0.912 | • | 11 | 242.9 | 1.8 | 0.0349 |
Beta coefficients ± standard errors for the categorical) in the top 13 AICc models competing for first ranking model.
Variables Habitat type (1 = Shrubland & Degraded forest; 2 = Teak stands; 3 = Tall forest; 4 = Community forest, reference category, not included) and Area (1 = Gunung besar; 2 = Payung-payung; 3 = Kumalasa, reference category, not included.
| Model ID | Habitat type 1 | Habitat type 2 | Habitat type 3 | Area 1 | Area 2 | No. of param-eters | AICc | Delta AICc | Akaike weight |
|---|---|---|---|---|---|---|---|---|---|
| 1 | -2.058 ± 0.766 | -1.360 ± 0.746 | -1.178 ± 0.509 | 7 | 241.1 | 0.0 | 0.0875 | ||
| 2 | 3 | 241.2 | 0.1 | 0.0835 | |||||
| 3 | -2.068 ± 0.768 | -1.372 ± 0.746 | -1.178 ± 0.511 | 8 | 241.5 | 0.4 | 0.0726 | ||
| 4 | -1.784 ± 0.796 | -1.160 ± 0.806 | -1.147 ± 0.519 | 0.530 ± 0.707 | 0.702 ± 0.872 | 10 | 241.8 | 0.6 | 0.0640 |
| 5 | -1.979 ± 0.771 | -1.513 ± 0.762 | -1.088 ± 0.516 | 8 | 241.9 | 0.7 | 0.0604 | ||
| 6 | 0.832 ± 0.727 | 0.767 ± 0.901 | 7 | 241.9 | 0.8 | 0.0572 | |||
| 7 | 0.704 ± 0.705 | 0.603 ± 0.861 | 6 | 242.0 | 0.9 | 0.0560 | |||
| 8 | 0.714 ± 0.707 | 0.479 ± 0.867 | 7 | 242.1 | 1.0 | 0.0522 | |||
| 9 | -1.997 ± 0.774 | -1.538 ± 0.768 | -1.095 ± 0.517 | 9 | 242.2 | 1.1 | 0.0504 | ||
| 10 | -1.758 ± 0.796 | -1.179 ± 0.806 | -1.119 ± 0.521 | 0.613 ± 0.731 | 0.799 ± 0.915 | 11 | 242.2 | 1.1 | 0.0503 |
| 11 | 0.762 ± 0.731 | 0.531 ± 0.922 | 8 | 242.6 | 1.5 | 0.0403 | |||
| 12 | 0.761 ± 0.724 | 0.661 ± 0.896 | 6 | 242.8 | 1.7 | 0.0365 | |||
| 13 | -1.694 ± 0.802 | -1.292 ± 0.821 | -1.049 ± 0.528 | 0.550 ± 0.709 | 0.632 ± 0.876 | 11 | 242.9 | 1.8 | 0.0349 |
Fig 4(a) Mean camera trap rate across the different habitat types shrubland and degraded forest (0.40 ± 0.26), teak plantation (0.45 ± 0.20), tall forest (0.77 ± 0.14) and community forest (2.55 ± 0.89), (b) Camera trap rate as a function of distance to nearest border (R2 = 0.067).
Top 5 competing AIC models competing for first rank.
Beta coefficients ± standard errors for each covariate are listed.
| Model ID | Habitat type | Tree density | Altitude | Distance to nearest border | Litter depth | Area | No. of param-eters | AIC | Delta AIC | Akaike weight |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | -0.711 ± 0.389 | -1.004 ± 0.493 | 0.653 ± 0.403 | 4 | 289.8 | 0.0 | 0.1329 | |||
| 2 | 0.490 ± 0.442 | -0.896 ± 0.493 | -1.284 ± 0.629 | 0.631 ± 0.420 | 5 | 290.2 | 0.4 | 0.1067 | ||
| 3 | 0.520 ± 0.414 | -0.621 ± 0.392 | -0.880 ± 0.442 | 4 | 241.5 | 1.1 | 0.0750 | |||
| 4 | -0.428 ± 0.298 | -0.604 ± 0.313 | 3 | 241.8 | 1.1 | 0.0745 | ||||
| 5 | -0.656 ± 0.318 | 2 | 241.9 | 1.1 | 0.0635 |
Averaged Beta values and upper and lower 95% confidence intervals for occupancy covariates.
| Covariates | Tree density | Upper 95% CI | Lower 95% CI |
|---|---|---|---|
| Tree density | 0.091 | 0.304 | -0.121 |
| Altitude | -0.269 | 0.179 | -0.716 |
| Dist. nearest border | -0.423 | 0.194 | -1.040 |
| Litter depth | 0.154 | 0.454 | -0.146 |
Fig 5Model-averaged predicted occupancy (Ψ) in relation to (a) The distance from the nearest border (95% CI = 0.194. -1.040), (b) Litter depth (95% CI = 0.454, -0.146), (c) Altitude (95% CI = 0.179, -0.716) and (d) Tree density (95% CI = 0.304, -0.121).
Predictor variables were log transformed.