Literature DB >> 27044100

Accumulation of formamide in hydrothermal pores to form prebiotic nucleobases.

Doreen Niether1, Dzmitry Afanasenkau1, Jan K G Dhont2, Simone Wiegand3.   

Abstract

Formamide is one of the important compounds from which prebiotic molecules can be synthesized, provided that its concentration is sufficiently high. For nucleotides and short DNA strands, it has been shown that a high degree of accumulation in hydrothermal pores occurs, so that temperature gradients might play a role in the origin of life [Baaske P, et al. (2007)Proc Natl Acad Sci USA104(22):9346-9351]. We show that the same combination of thermophoresis and convection in hydrothermal pores leads to accumulation of formamide up to concentrations where nucleobases are formed. The thermophoretic properties of aqueous formamide solutions are studied by means of Infrared Thermal Diffusion Forced Rayleigh Scattering. These data are used in numerical finite element calculations in hydrothermal pores for various initial concentrations, ambient temperatures, and pore sizes. The high degree of formamide accumulation is due to an unusual temperature and concentration dependence of the thermophoretic behavior of formamide. The accumulation fold in part of the pores increases strongly with increasing aspect ratio of the pores, and saturates to highly concentrated aqueous formamide solutions of ∼85 wt% at large aspect ratios. Time-dependent studies show that these high concentrations are reached after 45-90 d, starting with an initial formamide weight fraction of[Formula: see text]wt % that is typical for concentrations in shallow lakes on early Earth.

Entities:  

Keywords:  concentration problem; hydrothermal vents; molecular evolution; origin-of-life problem; thermophoresis

Mesh:

Substances:

Year:  2016        PMID: 27044100      PMCID: PMC4843465          DOI: 10.1073/pnas.1600275113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

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3.  Thermodiffusion in model nanofluids by molecular dynamics simulations.

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5.  Thermophoresis of polymers: nondraining vs draining coil.

Authors:  Konstantin I Morozov; Werner Köhler
Journal:  Langmuir       Date:  2014-05-23       Impact factor: 3.882

6.  Studies in prebiotic synthesis. II. Synthesis of purine precursors and amino acids from aqueous hydrogen cyanide.

Authors:  R A Sanchez; J P Ferris; L E Orgel
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Authors:  J P Ferris; A R Hill; R Liu; L E Orgel
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Review 8.  Formamide and the origin of life.

Authors:  Raffaele Saladino; Claudia Crestini; Samanta Pino; Giovanna Costanzo; Ernesto Di Mauro
Journal:  Phys Life Rev       Date:  2011-12-13       Impact factor: 11.025

9.  High-energy chemistry of formamide: a unified mechanism of nucleobase formation.

Authors:  Martin Ferus; David Nesvorný; Jiří Šponer; Petr Kubelík; Regina Michalčíková; Violetta Shestivská; Judit E Šponer; Svatopluk Civiš
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-08       Impact factor: 11.205

10.  The "macromolecular tourist": universal temperature dependence of thermal diffusion in aqueous colloidal suspensions.

Authors:  S Iacopini; R Rusconi; R Piazza
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  14 in total

1.  Thermodiffusion and hydrolysis of 1-Ethyl-3-(3-dimethylaminopropyl)carbodiimide (EDC).

Authors:  Doreen Niether; Simone Wiegand
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2.  Influence of temperature and charge effects on thermophoresis of polystyrene beads.

Authors:  Olga Syshchyk; Dzmitry Afanasenkau; Zilin Wang; Hartmut Kriegs; Johan Buitenhuis; Simone Wiegand
Journal:  Eur Phys J E Soft Matter       Date:  2016-12-22       Impact factor: 1.890

3.  Estimating the capacity for production of formamide by radioactive minerals on the prebiotic Earth.

Authors:  Zachary R Adam; Yayoi Hongo; H James Cleaves; Ruiqin Yi; Albert C Fahrenbach; Isao Yoda; Masashi Aono
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Review 5.  Chemomimesis and Molecular Darwinism in Action: From Abiotic Generation of Nucleobases to Nucleosides and RNA.

Authors:  Raffaele Saladino; Judit E Šponer; Jiří Šponer; Giovanna Costanzo; Samanta Pino; Ernesto Di Mauro
Journal:  Life (Basel)       Date:  2018-06-20

6.  Considering planetary environments in origin of life studies.

Authors:  Laura M Barge
Journal:  Nat Commun       Date:  2018-12-12       Impact factor: 14.919

Review 7.  A Universal Geochemical Scenario for Formamide Condensation and Prebiotic Chemistry.

Authors:  Raffaele Saladino; Ernesto Di Mauro; Juan Manuel García-Ruiz
Journal:  Chemistry       Date:  2018-12-27       Impact factor: 5.236

8.  The key role of meteorites in the formation of relevant prebiotic molecules in a formamide/water environment.

Authors:  Luca Rotelli; Josep M Trigo-Rodríguez; Carles E Moyano-Cambero; Eleonora Carota; Lorenzo Botta; Ernesto Di Mauro; Raffaele Saladino
Journal:  Sci Rep       Date:  2016-12-13       Impact factor: 4.379

9.  Thermophoretic migration of vesicles depends on mean temperature and head group chemistry.

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Review 10.  The Prevailing Catalytic Role of Meteorites in Formamide Prebiotic Processes.

Authors:  Raffaele Saladino; Lorenzo Botta; Ernesto Di Mauro
Journal:  Life (Basel)       Date:  2018-02-22
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