Literature DB >> 27040765

Inter-domain interactions of TDP-43 as decoded by NMR.

Yuanyuan Wei1, Liangzhong Lim2, Lu Wang2, Jianxing Song3.   

Abstract

TDP-43 inclusions have been found in ∼97% ALS as well as an increasing spectrum of other neurodegenerative diseases including Alzheimer's. TDP-43 contains an ubiquitin-like fold, two RRMs and a prion-like domain, but whether they interact with each other remains unknown due to being intrinsically aggregation-prone. Nevertheless, this knowledge is pivotal to understanding physiological functions and pathological roles of TDP-43. Here as facilitated by our previous discovery which allowed NMR characterization of TDP-43 and its five dissected fragments, we successfully decoded that TDP-43 does have dynamic inter-domain interactions, which are coordinated by the intrinsically-disordered prion-like domain. Thus, TDP-43 appears to undergo conformational exchanges between "closed" and "open" states which are needed for its functions. Our study thus offers a mechanism by which cellular processes might control TDP-43 physiology and proteinopathy by mediating its inter-domain interactions.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Amyotrophic lateral sclerosis (ALS); Frontotemporal dementia (FTD); Inter-domain interaction; NMR spectroscopy; Prion-like domain; TDP-43

Mesh:

Substances:

Year:  2016        PMID: 27040765     DOI: 10.1016/j.bbrc.2016.03.158

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  9 in total

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Authors:  Hari Prasad Osuru; Patcharin Pramoonjago; Mayuresh M Abhyankar; Eric Swanson; LaToya Ann Roker; Helen Cathro; Prabhakara P Reddi
Journal:  Mol Reprod Dev       Date:  2017-07-18       Impact factor: 2.609

2.  Point mutations in the N-terminal domain of transactive response DNA-binding protein 43 kDa (TDP-43) compromise its stability, dimerization, and functions.

Authors:  Miguel Mompeán; Valentina Romano; David Pantoja-Uceda; Cristiana Stuani; Francisco E Baralle; Emanuele Buratti; Douglas V Laurents
Journal:  J Biol Chem       Date:  2017-05-31       Impact factor: 5.157

3.  A single N-terminal phosphomimic disrupts TDP-43 polymerization, phase separation, and RNA splicing.

Authors:  Ailin Wang; Alexander E Conicella; Hermann Broder Schmidt; Erik W Martin; Shannon N Rhoads; Ashley N Reeb; Amanda Nourse; Daniel Ramirez Montero; Veronica H Ryan; Rajat Rohatgi; Frank Shewmaker; Mandar T Naik; Tanja Mittag; Yuna M Ayala; Nicolas L Fawzi
Journal:  EMBO J       Date:  2018-02-09       Impact factor: 11.598

4.  Analysis of the substrate recognition state of TDP-43 to single-stranded DNA using fluorescence correlation spectroscopy.

Authors:  Akira Kitamura; Ai Shibasaki; Kayo Takeda; Ryoji Suno; Masataka Kinjo
Journal:  Biochem Biophys Rep       Date:  2018-04-12

5.  ATP binds and inhibits the neurodegeneration-associated fibrillization of the FUS RRM domain.

Authors:  Jian Kang; Liangzhong Lim; Jianxing Song
Journal:  Commun Biol       Date:  2019-06-20

Review 6.  Structural Insights Into TDP-43 and Effects of Post-translational Modifications.

Authors:  Liberty François-Moutal; Samantha Perez-Miller; David D Scott; Victor G Miranda; Niloufar Mollasalehi; May Khanna
Journal:  Front Mol Neurosci       Date:  2019-12-17       Impact factor: 5.639

7.  A combined NMR and EPR investigation on the effect of the disordered RGG regions in the structure and the activity of the RRM domain of FUS.

Authors:  A Bonucci; M G Murrali; L Banci; R Pierattelli
Journal:  Sci Rep       Date:  2020-12-01       Impact factor: 4.379

8.  Tethering-induced destabilization and ATP-binding for tandem RRM domains of ALS-causing TDP-43 and hnRNPA1.

Authors:  Mei Dang; Yifan Li; Jianxing Song
Journal:  Sci Rep       Date:  2021-01-13       Impact factor: 4.379

9.  RRM domain of ALS/FTD-causing FUS characteristic of irreversible unfolding spontaneously self-assembles into amyloid fibrils.

Authors:  Yimei Lu; Liangzhong Lim; Jianxing Song
Journal:  Sci Rep       Date:  2017-04-21       Impact factor: 4.379

  9 in total

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