Literature DB >> 27037711

Key Considerations and Methods in the Study of Gene-Environment Interactions.

Paul H G Simon1, Marie-Pierre Sylvestre1, Johanne Tremblay1, Pavel Hamet2.   

Abstract

With increased involvement of genetic data in most epidemiological investigations, gene-environment (G × E) interactions now stand as a topic, which must be meticulously assessed and thoroughly understood. The level, mode, and outcomes of interactions between environmental factors and genetic traits have the capacity to modulate disease risk. These must, therefore, be carefully evaluated as they have the potential to offer novel insights on the "missing heritability problem", reaching beyond our current limitations. First, we review a definition of G × E interactions. We then explore how concepts such as the early manifestation of the genetic components of a disease, the heterogeneity of complex traits, the clear definition of epidemiological strata, and the effect of varying physiological conditions can affect our capacity to detect (or miss) G × E interactions. Lastly, we discuss the shortfalls of regression models to study G × E interactions and how other methods such as the ReliefF algorithm, pattern recognition methods, or the LASSO (Least Absolute Shrinkage and Selection Operator) method can enable us to more adequately model G × E interactions. Overall, we present the elements to consider and a path to follow when studying genetic determinants of disease in order to uncover potential G × E interactions. © American Journal of Hypertension, Ltd 2016. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Keywords:  blood pressure; environment; gene; heritability; hypertension; interaction; medication.

Mesh:

Year:  2016        PMID: 27037711     DOI: 10.1093/ajh/hpw021

Source DB:  PubMed          Journal:  Am J Hypertens        ISSN: 0895-7061            Impact factor:   2.689


  11 in total

1.  Histone demethylase LSD1 deficiency and biological sex: impact on blood pressure and aldosterone production.

Authors:  Yuefei Huang; Pei Yee Ting; Tham M Yao; Tsuyoshi Homma; Danielle Brooks; Isis Katayama Rangel; Gail K Adler; Jose R Romero; Jonathan S Williams; Luminita H Pojoga; Gordon H Williams
Journal:  J Endocrinol       Date:  2019-02-01       Impact factor: 4.286

Review 2.  The Epigenetic Machinery in Vascular Dysfunction and Hypertension.

Authors:  Emile Levy; Schohraya Spahis; Jean-Luc Bigras; Edgard Delvin; Jean-Michel Borys
Journal:  Curr Hypertens Rep       Date:  2017-06       Impact factor: 5.369

Review 3.  Noncoding RNAs in the Regulatory Network of Hypertension.

Authors:  Gengze Wu; Pedro A Jose; Chunyu Zeng
Journal:  Hypertension       Date:  2018-11       Impact factor: 10.190

Review 4.  Environment, susceptibility windows, development, and child health.

Authors:  Robert O Wright
Journal:  Curr Opin Pediatr       Date:  2017-04       Impact factor: 2.856

Review 5.  Extracellular Vesicle-Mediated Vascular Cell Communications in Hypertension: Mechanism Insights and Therapeutic Potential of ncRNAs.

Authors:  Ji-Ru Zhang; Hai-Jian Sun
Journal:  Cardiovasc Drugs Ther       Date:  2020-09-22       Impact factor: 3.727

Review 6.  Assessing the Heritability of Complex Traits in Humans: Methodological Challenges and Opportunities.

Authors:  Alexandra J Mayhew; David Meyre
Journal:  Curr Genomics       Date:  2017-08       Impact factor: 2.236

7.  PROX1 gene CC genotype as a major determinant of early onset of type 2 diabetes in slavic study participants from Action in Diabetes and Vascular Disease: Preterax and Diamicron MR Controlled Evaluation study.

Authors:  Pavel Hamet; Mounsif Haloui; François Harvey; François-Christophe Marois-Blanchet; Marie-Pierre Sylvestre; Muhammad-Ramzan Tahir; Paul H G Simon; Beatriz Sonja Kanzki; John Raelson; Carole Long; John Chalmers; Mark Woodward; Michel Marre; Stephen Harrap; Johanne Tremblay
Journal:  J Hypertens       Date:  2017-05       Impact factor: 4.844

Review 8.  Genetic Susceptibility to Chronic Kidney Disease - Some More Pieces for the Heritability Puzzle.

Authors:  Marisa Cañadas-Garre; Kerry Anderson; Ruaidhri Cappa; Ryan Skelly; Laura Jane Smyth; Amy Jayne McKnight; Alexander Peter Maxwell
Journal:  Front Genet       Date:  2019-05-31       Impact factor: 4.599

9.  Risk for hypertension crosses generations in the community: a multi-generational cohort study.

Authors:  Teemu J Niiranen; Elizabeth L McCabe; Martin G Larson; Mir Henglin; Neal K Lakdawala; Ramachandran S Vasan; Susan Cheng
Journal:  Eur Heart J       Date:  2017-08-01       Impact factor: 29.983

10.  Interactions Between Genome-Wide Genetic Factors and Smoking Influencing Risk of Systemic Lupus Erythematosus.

Authors:  Jing Cui; Soumya Raychaudhuri; Elizabeth W Karlson; Cameron Speyer; Susan Malspeis; Hongshu Guan; Jeffrey A Sparks; Hongru Ni; Xinyi Liu; Emma Stevens; Jessica N Williams; Emma E Davenport; Rachel Knevel; Karen H Costenbader
Journal:  Arthritis Rheumatol       Date:  2020-09-23       Impact factor: 10.995

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