Literature DB >> 27034217

CONSTRUCTION AND CHARACTERIZATION OF A TENTATIVE AMPLIFIED FRAGMENT LENGTH POLYMORPHISM-SIMPLE SEQUENCE REPEAT LINKAGE MAP OF LAMINARIA (LAMINARIALES, PHAEOPHYTA)(1).

Guanpin Yang1, Ying Sun1, Yuanyuan Shi1, Linan Zhang1, Shanshan Guo1, Bingjun Li1, Xiaojie Li1, Zhiling Li1, Yizhou Cong1, Yushan Zhao1, Wenquan Wang1.   

Abstract

A tentative amplified fragment length polymorphism-simple sequence repeat (AFLP-SSR) linkage map of Laminaria was constructed using a haploid population of 40 gametophyte clones isolated from an individual of Dongfang No. 2, the first commercially cultured hybrid of a female gametophyte clone of L. japonica Aresch. [=Saccharina japonica (Aresch.) C. E. Lane, C. Mayes et G. W. Saunders] and a male one of L. longissima Miyabe [=Saccharina longissima (Miyabe) C. E. Lane, C. Mayes et G. W. Saunders]. To the map, 263 markers (255 AFLP, seven SSR, and the gametophyte sex) were assigned. The map consisted of 25 linkage groups (LGs) with ≥ four markers, five triplets, and 15 doublets, which is 1,629.0 centiMorgans (cM) in length, covering 66% of Laminaria genome. The maximum space between loci is 24.63 cM. A putative sex-determining region was identified in LG2 , which was characterized by a dense marker distribution around the gametophyte sex locus. The linkage map itself and the methodology associated with its construction will facilitate the genetic study and further trials of the linkage map construction of Laminaria.
© 2009 Phycological Society of America.

Entities:  

Keywords:  AFLP; Laminaria; SSR; linkage map; microsatellite DNA; sex determination

Year:  2009        PMID: 27034217     DOI: 10.1111/j.1529-8817.2009.00720.x

Source DB:  PubMed          Journal:  J Phycol        ISSN: 0022-3646            Impact factor:   2.923


  5 in total

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Journal:  PLoS One       Date:  2013-03-20       Impact factor: 3.240

4.  High-density SNP-based QTL mapping and candidate gene screening for yield-related blade length and width in Saccharina japonica (Laminariales, Phaeophyta).

Authors:  Xiuliang Wang; Zhihang Chen; Qiuying Li; Jie Zhang; Shun Liu; Delin Duan
Journal:  Sci Rep       Date:  2018-09-11       Impact factor: 4.379

5.  MRP3 is a sex determining gene in the diatom Pseudo-nitzschia multistriata.

Authors:  Monia T Russo; Laura Vitale; Laura Entrambasaguas; Konstantinos Anestis; Neri Fattorini; Filomena Romano; Carmen Minucci; Pasquale De Luca; Elio Biffali; Wim Vyverman; Remo Sanges; Marina Montresor; Maria I Ferrante
Journal:  Nat Commun       Date:  2018-11-28       Impact factor: 14.919

  5 in total

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